Vibrio paracholerae: SA104470976_00116
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Entry
SA104470976_00116 CDS
T08432
Symbol
yhgF
Name
(GenBank) transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SA104470976_00116 (yhgF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
DUF7645
RecG_N
Motif
Other DBs
NCBI-ProteinID:
SYZ80278
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Position
1:complement(112783..115104)
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AA seq
773 aa
AA seq
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MSKAICHQIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLA
YLREMDDRRQTILKSIQEQGKLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEA
GLEPLADTLWTQPNTDPESEAAKYINAEKGVADSKAALDGARAIVMERIAEDANLLEKIR
QHLNRNAEIVSRVVEGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNA
DPELEESARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKE
RAEIEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHA
PQHQYDRAMQSIALLVKKFNVDLIAIGNGTASRETDAFAADLIKRGNLKVQKIMVSEAGA
SVYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLA
KRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVP
RLGPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPLVKTIAEKNSKDLKALIGNTEFLRTL
RAVDYTDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGIHEVSDLEVGMVLEGVVSN
VANFGAFVDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMR
LNDEPGQDNRSQRSAAPRAGQERRAPRRDEPQGNALGGAMGGAFAAAFAKAKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctatctgccaccagattgctcaagaactgaacgttcgccctgagcaagtt
atcgctgccgtcaccctgatcgacgatggcaataccgttccttttatcgcccgttatcgt
aaagaggtgacgggaggattggatgatacccaactgcgcaacttagatagccgtcttgcc
tatctgcgtgagatggatgaccgtcgccaaaccatcctcaaatcgattcaagaacaaggc
aaactcacccctgagctggagcaggcaattttaagtgccgacagcaaaaaccgccttgaa
gatctctatctgccttacaaaccgaaacgccgcaccaaaggtcaaatcgcgattgaagcg
ggtcttgagccgctggctgatacattgtggacacagcctaatactgaccctgaaagcgaa
gcggcaaaatacattaatgccgagaaaggcgtcgctgacagcaaagccgcactggatggc
gcacgcgctatcgtgatggagcgcatcgcggaagatgccaacctactggaaaaaatccgt
cagcacctcaatcgcaacgcggaaattgtatcgcgcgtggtcgaaggcaaagagcaagcg
ggcgagaaatttaaagattactttgatcaccgcgagccgatcagcaaagcgccttcgcat
cgcgcgttggccatgctgcgtggccgtaatgagggtttcttaaccctgacgttgaatgcc
gatcctgaattggaagagagtgcgcgccaatcctactgcgaaactctgattgccgagcat
tacggcattcatttgagccaagcgacggccgatgcgtggcgcaaacaggtgatcagttgg
gcatggaaaatcaaaatctccatgcacatggaaaccgaactgatgagcgcgatgaaagag
cgcgcagaaattgaagcgattgaagtctttgccaccaacttaaaagatctgctgatggcg
gcaccggccggtcctcgcgcgacactgggcctcgatccgggtctgcgcactggctgtaaa
gtcgcggtggttgatgcaaccggtaaagtgctggcaaccgacaccatttacccacacgca
ccacagcatcagtacgatcgcgccatgcagtctattgctctgctggtgaaaaagttcaac
gtggatctgattgcgattggtaacggtacggcgtcgcgtgaaaccgatgcttttgcggcg
gatttaatcaagcgcggcaacctcaaagtgcaaaaaatcatggtcagcgaagcgggtgca
tcggtgtattccgcttcagagctggcggcgaaagagttcccaaatctcgatgtgtcgctg
cgcggcgcagtctctatcgcgcgtcgtctgcaagacccactcgcagaattagtgaagatc
gacccgaaatcgatcggggttggccagtatcaacacgatgtgagccaaaccctgctcgcg
aaacgtctggatgcgattgttgaggactgtgtaaacgccgtgggtgtggatgtgaatacc
gcttcggctgcactactgactcgtgttgcgggtttgtctgcggcactcgcgcaaaacatt
gtggattatcgtgatgaaaatggccgttttgagtcgcgtagcgccctcaaaaaagtgccg
cgtttggggcctaaagcgtttgaacagtgtgccggcttcctgcgcattatggatggcaaa
aacccgctcgatgcctcggcagtacacccagaagcgtacccattggtgaaaaccatcgcc
gagaaaaacagcaaagatctgaaagcgctgattggcaataccgagttcctgcgcaccctg
cgcgcggtcgattacaccgatgaaaactttggtgtacccaccgtgaccgacatcatcaag
gagctggataaaccggggcgtgacccgcgtccggaattcaaaaccgcgacctttgctgaa
ggcatccatgaggtgtcggatctagaagtaggcatggtgttggaaggcgtggtctcaaac
gtcgccaactttggcgcgttcgtggatatcggcgtccatcaagatggcttagtgcatatt
tctgcgctgaccgatcgctttatctcggatccgcgtgaagtggttaaagccggtgacatc
gtcaaagtcaaagtgatggaagtggatgtgcagcgtaagcggatcgccctttcgatgcgc
ttaaacgatgagccgggacaagataaccgtagccaacgcagcgctgcgccacgcgcaggg
caagagcgtcgcgctccgcgccgtgatgaaccgcaaggtaatgctctgggtggcgcgatg
ggcggtgcgtttgccgccgctttcgctaaagcgaagaaatag
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