Vibrio paracholerae: SA104470976_00157
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Entry
SA104470976_00157 CDS
T08432
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SA104470976_00157 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpl03400
]
SA104470976_00157 (priA)
Enzymes [BR:
vpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SA104470976_00157 (priA)
DNA repair and recombination proteins [BR:
vpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SA104470976_00157 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
AAA_19
TrwB_AAD_bind
PIF1
AAA_22
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
SYZ80319
LinkDB
All DBs
Position
1:164050..166254
Genome browser
AA seq
734 aa
AA seq
DB search
MRPTIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSLTHQSDFPIEQ
LKFVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWR
LTALGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEE
RKPVARSWPQELEAKVDKPKLNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLIT
PVLARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI
VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATP
ALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGN
QVMLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGC
GSTQLVTVGVGTEQLEGQLQSLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGT
QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH
HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRET
LRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLSS
KVRWSIDIDPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccaccattgcccgagtttgcctgcctgtacctctggataagtctttcgactat
ctgatcccagctcatctatttccagtgctgggcggtcgtgtacaagtgccttttgggcga
caaaccttggtcggtattgtccagtcgctgacacatcaatccgattttcctatcgaacaa
ctgaaattcgtgcaagccgttttggatgacgcgcccgtgtggccagataaactgcagtct
ctgctgcactggtgtagtcagttttatcattatccgctcggagagacgtacgcgaatgcc
ttgcccggcgcactgcgcaaaggcaaggcggcagagttgactagccataaggagtggcgt
ttgaccgcgcttggtcaagagcaattgatgcaaggggtgaagcgtggcgcagtaaagcaa
gcgcaagtccttcacctgctgcagcacggcgctttatcgcaccaaactttgcttgatgaa
gaggtgagcagcacgaccctcaaagccttggtcgaaaaagggtggatcgagtgtgaagag
cgtaaacctgtggcgcgttcttggccgcaagagctggaagccaaagtcgataaacctaag
cttaatcaagagcaggcgatcgcgattgcggcggtgaatagccagcaaggtttcggctgc
tttttattagaaggggtaacgggctcaggcaaaacagaggtgtatcttaacctcatcaca
cctgtattggcgcgtggtgaacaagccttggtgttggtgccggaaattggtttaacccca
caaaccatcaaccgttttcgccaacgttttaatgtccccgttgaagtgatgcactcggcg
ctcaacgatactgaacgcctcaacgcttggctggcggcgcgcgataaagtggcggggatt
gtgattggtacgcgctctgcgctgctcacgccctttgccaaattgggcattattattgtt
gatgaagaacatgatagttcttacaagcagcaagatagcctgcgttatcacgctcgagat
gtggctgtgatgcgcgcgcatttggaaaatattccgatcgtgcttggctcggcgacgcca
gccttggaaacgttgcataatgcgctcagtggtaaataccatcacttgcaactgacgcag
cgcgccggtaatgcgctacctacacgtaaccacgctttggatgtgaaagggctctatcta
gaaagtggcttgtctgcgcctttgattgcagaaatgcgccgccatttgtcggcgggcaat
caggtgatgctgtttttaaaccgccgcggtttttctccggccttgatgtgtcacgaatgt
ggctggattgcggagtgtcagcgctgcgatgcctactacacctaccaccaacacagcaat
gaaatgcgttgccaccattgtggttcacagcgtcctgtgctccatcaatgcaaaggatgc
ggctcaacccagttagtgacggttggggtggggacggagcaattggaagggcaattgcaa
agcttatttccagaatatcgctcggtgcgaattgatcgagatagcacgcggcgtaaaggc
agtttggaatcggcgttaaccgcgattcgcaaaggcgaatatcagattttgattggtacg
caaatgctcgccaaaggacatcacttccccgatgttaccttggttgcgctattagatgtc
gatggctcattgtacagcagtgattttcgcgcttctgagcgtttggctcagctctttatt
caagtcgcagggcgggcagggcgagccagtaagcctggcgaagtggtgctacaaacccat
catcccgaacacagtttgctacaagccttactgcataaggattaccaccactttgctttg
acggcgttggaagagcgcaaactggcgcagttgcccccttattctttcttgagcttattt
cgagctgaagccaatcataccgctcaagtggaagattttctgcgccaagtgcgcgaaacc
ttacgctgcaatccttggtttgatagcgaatgtatggtgctcgggccaacgcctgcgcca
ctcgcgaaacgagcgggaaaattccgttggcagctcttgctacaaacgccgaatcgcacc
ctgatgcagaaaattttgcaaagcgcacgtccagcactgcaacaattaccgctgtcgagc
aaggtgcgctggtcgatcgatattgatccacaagatttgagctaa
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integrated database retrieval system
