Vibrio paracholerae: SA104470976_00315
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Entry
SA104470976_00315 CDS
T08432
Symbol
rapA_1
Name
(GenBank) RNA polymerase associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpl03021
]
SA104470976_00315 (rapA_1)
Transcription machinery [BR:
vpl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SA104470976_00315 (rapA_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
AAA_34
Helicase_RecD
AAA_22
WWE
Motif
Other DBs
NCBI-ProteinID:
SYZ80476
LinkDB
All DBs
Position
1:313326..314993
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AA seq
555 aa
AA seq
DB search
MSFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARSDAPVTRVIFNVGDV
VDSQQGWSLQVEQVVEDEGVYTYLGTRVDTEESGVALREIFLSNQIRFNKPQDKLFAGQI
DRMDNFVLRYRALTNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLTGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFS
EADNPFETQQYVLCSLDFLRKSRQRFEQALEAEWDLLVVDEAHHLEWHPEKPSREYQVIE
ALAEQTPGVLLLTATPEQLGRESHFARLRLLDADRFYDYQAFLQEEEQYAPVADAVTALF
SGEKLSDEAKNKITELLSEQDVEPLFKALESHASEDEIALARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLLPLEIPSQYTTSMRVAGMLGGKLTPEARAMKMLYPEEIFQEFE
GEESSWWQFDSRVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGMKVCRSLNAT
KPRLILPKKRAARRY
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgctttagggcaacgctggataagcgatacggaaagtgatctcgggttaggt
actgtggtggcgcttgatgcgcgtacagtgaccttgatgtttgcagcatcggaagaaaat
cgtgtgtatgcacgctcagatgcgccggtcacccgtgtgatctttaatgtcggcgatgtg
gtggatagtcagcaaggctggtcgttacaagttgaacaagtggtggaagacgaaggtgtc
tacacctatctaggcacgcgagtggataccgaagaaagcggtgtcgcgctgcgtgaaatt
ttcctcagtaaccaaattcgttttaataaaccgcaggataagttgtttgctggtcaaatc
gatcgcatggacaacttcgtgctgcgttatcgcgctcttaccaatcaatatcaacagcac
aaaagcccaatgcgtggcttgtgtggtatgcgcgctgggctgatcccgcatcagttgtat
atcgcccatgaagtcggtcgccgccatgcgccacgcgtattgttagctgatgaagtcggt
ttgggtaaaaccatcgaagcgggcatgatcatccatcagcaagtgctgaccgggcgtgcc
gagcgcatcctaattgtggtacctgaaacgctgcaacaccaatggttggtggagatgatg
cgccgtttcaacctgcacttttcgatttttgatgaagagcgctgtgtggaagcctttagc
gaggccgataacccatttgaaactcagcagtatgtgctgtgttcactcgatttcctgcgt
aaaagccgccagcgttttgaacaagccttggaagcggaatgggatttgttggtggtcgat
gaagcgcaccatcttgagtggcacccagaaaagccaagccgcgaatatcaagtgattgaa
gctctggccgaacagactccgggcgtgttgctattgacggcaacgcctgagcagttaggt
cgtgaaagccactttgcccgtctgcgcctgttggatgcggatcgtttctacgattatcaa
gcttttttacaagaagaagagcagtacgcaccggttgccgatgccgttactgcgctgttc
agcggtgagaagctgagtgatgaagcgaaaaacaaaatcacagagcttctgtctgagcag
gatgtggagccgctgtttaaagcgttggaaagccacgccagcgaggacgaaattgctttg
gcgcgccaagagctgatcgacaatctaatggatcgccacggtactggtcgcgtgttgttc
cgtaacacgcgtgcggcaatcaaaggcttcccagtacgtaatgtgcatttgctgccattg
gaaattccttctcaatacaccacttcaatgcgggttgcgggcatgctcggcggtaaactg
acgccagaagcgcgcgcgatgaaaatgctctacccagaagagattttccaagagtttgaa
ggcgaggagtcaagctggtggcaatttgactcacgcgtcaactggctgctcgaaaaagtc
aaagccaaacgcagcgagaagatcctcgtcatcgcttcacgtgccagtaccgcattgcag
ctagagcaggcactgcgtgagcgtgagggtatgaaggtatgtcgatcattgaacgcgaca
aagccgcggcttattttgcccaagaagagggcggcgcgcaggtactga
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