Vibrio paracholerae: SA104470976_00423
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Entry
SA104470976_00423 CDS
T08432
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00470
D-Amino acid metabolism
vpl00550
Peptidoglycan biosynthesis
vpl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SA104470976_00423 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SA104470976_00423 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vpl01011
]
SA104470976_00423 (murD)
Enzymes [BR:
vpl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SA104470976_00423 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vpl01011
]
Precursor biosynthesis
Amino acid ligase
SA104470976_00423 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
Pyr_redox_2
NAD_binding_8
TrkA_N
SAM_HAT_N
NAD_binding_9
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
SYZ80574
LinkDB
All DBs
Position
1:435094..436416
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AA seq
440 aa
AA seq
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MDRWQGIQHVVVVGLGITGLSVVNYLRKYHPSVTVQVIDTRETPPGQEQLSSDVALHRGG
WNLEWLLNADLVVTNPGIALATPEIQQVLAAGIPVVGDIELFAWHVDTPVIAITGSNGKS
TVTDLSGVLANAAGVKAAVGGNIGVPALDLISPDVELYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYQGMEDYRQAKLRIFDHAETAVVNADDTQTFPDHAAHLQVVMFGVEQAAQ
FSLAQHQGREYLFARDEAVMACAELSLVGRHNVANVLTVLALLDSAGVNFRLALDALKSY
TGLTHRCQVVADNHGIKWVNDSKATNVASTLAALSGLKIAGQLYLLVGGVGKGADFTPLA
PVLATLPVQLCCFGVDGHQFMPLHPSARFYDSMESIIRSIRPQLKSGDMVLLSPACASFD
QFKNFMARGDIFAQLARQYA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggaccgttggcaaggcatacagcatgtggtcgtcgtagggctcgggattaccgggctc
tctgtcgttaattatctgcgaaaatatcatccgtcggtaaccgtacaggttatcgatacg
cgcgaaacgccaccggggcaagagcagctttcgtcggacgttgcattgcatcgtggcggt
tggaatcttgagtggttactcaatgccgatttggtggtcaccaacccaggcattgcgttg
gcgactcctgagattcaacaagtactggcagctgggattcctgttgtgggggatattgag
ctgtttgcatggcatgtggatacacccgttattgcgatcactggctcgaacggcaaaagt
accgtcactgatttaagtggtgtgttagccaatgctgctggtgtgaaggccgcggtaggc
ggcaatattggggttccggcactggatctgatttctccagacgttgaactgtatgtgctt
gagctatcaagcttccaattagaaaccacctctagtctaaaactgaaagcggccgcgttt
ctcaatctttctgaagatcatatggatcgttatcaggggatggaggattaccgccaagcc
aaactgcgcattttcgatcatgccgaaaccgcagtggtgaatgccgatgatactcaaacc
tttcctgaccacgcggcgcatctgcaagtggtgatgtttggtgtcgagcaagcggcacaa
tttagccttgctcaacatcaaggccgagaatacctttttgcgcgcgatgaggccgtcatg
gcgtgtgctgagctgagtttagttggccgtcataacgtggcaaacgtacttaccgtgtta
gctttgctggattcagcaggagtaaacttccgtttggctttggatgcactcaagtcttac
acgggtttgacacaccgctgccaagtggttgccgataatcacggcatcaagtgggtcaat
gattctaaggcgaccaatgttgcgagtacgctggcagcgttgtcgggattaaaaatcgca
ggccagctctatttgctagttggtggggtgggtaaaggggcggatttcacgccgctcgcc
cccgtattggcgacattgcctgtgcaattgtgctgctttggtgtggacggccatcaattt
atgccactgcacccttcggctcggttttatgactcgatggagagcataattcgctcaatt
cgcccgcagttaaaaagtggggatatggtgctgctctctcccgcttgtgcgagctttgat
cagttcaaaaactttatggcgcgtggggatatttttgcccaactcgctcggcaatatgca
taa
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