Vibrio paracholerae: SA104470976_00463
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Entry
SA104470976_00463 CDS
T08432
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SA104470976_00463 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpl03400
]
SA104470976_00463 (nfo)
Enzymes [BR:
vpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SA104470976_00463 (nfo)
DNA repair and recombination proteins [BR:
vpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SA104470976_00463 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
SYZ80613
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All DBs
Position
1:489856..490716
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AA seq
286 aa
AA seq
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MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKK
WGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVS
EEACLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIEQVEDKERVGVCL
DTCHTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGE
IGWECFEYIAQDTRFNGIPLILETIDPDIWATEIAMLRKFSTQKEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaagttaatcggggcacatgtatcggcctctggtggtgttgaactcgcgcca
gttcgagctcatgaaatcggagcgaatgcttttgctctcttcaccaaaaaccagcgccaa
tgggcagctaagccactggaagcgagcagcattcgtgctttcaaagccaattgtaaaaaa
tggggatttggcagtgaggcgattttgccgcacgactcttatctgattaatttaggggct
ccggaacctgagaagctcgacaaatcacgagccgcttttgttgatgaaatgctgcgttgt
gatcagttagggttaactttgcttaactttcaccccggcagtcatttgcagcaggtctca
gaagaggcgtgtttagcgacaattgctgagtcaattaatcttgcacatcgtcaagtaccg
aatgtgattgcggtgattgaaaataccgcaggacaggggagtaacttaggttggcgtttt
gagcatctggcggcaattattgagcaagttgaggataaagagcgggttggtgtatgccta
gatacttgccacacctttgccgcagggtatgacttgcgtacgaaagctgcgtgtgatgag
actttcgctgagtttgagcgagtggtcggtatgcactatttgcgcgcaatgcacatcaat
gattcaaaaggcaagctggctagtcgtgttgaccgccatcattccttaggtatgggagag
attggctgggagtgttttgagtatatcgcgcaagatactcgatttaacggtatccctctg
attttagaaacgattgatcctgatatttgggcgactgagatcgcaatgctacgcaaattt
tcgacgcaaaaagagaattaa
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