Vibrio paracholerae: SA104470976_00597
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Entry
SA104470976_00597 CDS
T08432
Symbol
ompA_1
Name
(GenBank) outer membrane protein OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_00597 (ompA_1)
Transporters [BR:
vpl02000
]
Other transporters
Pores ion channels [TC:
1
]
SA104470976_00597 (ompA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF748
DUF2490
Phage_OMP
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
SYZ80745
LinkDB
All DBs
Position
1:640225..641190
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AA seq
321 aa
AA seq
DB search
MKKLAAIISATLLFASSAAVAEVYVGGKVGKSWLEDACQAGQSCEDDDQVVGAFLGYQAN
KWLSVEAGYDYLGKFTAAGLNDEKVQAVTLAPKLSIPLTEGIALYGKVGGAYVDYGSKDD
YSYLGAAGLEFNTNHNVTMRLEYQNLTDINNDIVRARAETATLGIAYKFGGSEEPAPVVE
QRPAEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIVGYLNQYPQA
KVEVVGHTDSTGSDAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASNATAE
GRQKNRRVELVIPEFQYKITE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctagcggcaattatttcagcgacgttactttttgcttcttctgcggcagtg
gcagaagtgtatgtcggaggtaaggtcggtaaatcttggttagaagacgcatgccaagct
ggtcaatcttgtgaagatgatgatcaggttgtaggcgcgtttctgggttaccaagcaaac
aaatggctttctgtggaagcaggttacgactacttaggtaagtttactgcagctggattg
aatgatgagaaggtacaagcggtaacgctagcaccaaaactcagcattcctctgactgaa
ggtatcgcgctgtacggtaaagtaggtggtgcttatgtcgattacggcagcaaggacgac
tactcatacctaggtgcagcaggcctagagttcaacactaaccacaatgtcactatgcgt
ttggaataccaaaacctgactgacattaataacgacatcgtacgtgcacgcgcagaaacc
gctacactcggtatcgcttataagtttggtggtagtgaagagccagcaccagtggtagaa
cagcgcccagctgaacctgcacctgttgccgcaccagtcgagaaagtggcagtcaccaaa
acctttactttccaacatctggatagcagcacctttgctaccgcaagtgctgagctaaaa
ccagcaacggttcagaaattggataaaattgtgggttacctaaaccaatatccacaagca
aaagtagaagtagttggtcatactgactcaacaggttctgacgcttacaaccaaaagctg
tctgagcgtcgtgctcaagcagtagcgaaagcactagaagctcaaggtattgatgcatct
cgtatttcagctaaaggtctaggcgaaagcagcccaatcgcttctaacgcgactgcagaa
ggtcgtcagaagaaccgtcgtgttgagctagtgatccctgaattccagtacaaaattact
gaataa
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