Vibrio paracholerae: SA104470976_00811
Help
Entry
SA104470976_00811 CDS
T08432
Symbol
yeaP
Name
(GenBank) GGDEF family protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
SA104470976_00811 (yeaP)
Enzymes [BR:
vpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
SA104470976_00811 (yeaP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Lig_chan-Glu_bd
DUF2116
Motif
Other DBs
NCBI-ProteinID:
SYZ80940
LinkDB
All DBs
Position
1:847564..849585
Genome browser
AA seq
673 aa
AA seq
DB search
MLLNAFSRRALLWLGWLLISTSSLAATSPTYKVATEADDVVTRVLFDSIAHYFHLEIEYV
NYPSFNDILVAIETGNADFAANITYTDLRAQRFDFSRPTNIEYTYLYGYGGLRLPELRLV
GIPKGTIYGTLLKEHYPYIQQVEYEGYLEALTLLESGRVDGVVDAINQLKPMLIKGLDAQ
LLNDQLPIQPVSIVTPKGKHSALLGKIEKYAHSPHVQRLLRESIQKYQLDIRKQALRQAV
VDSGLNAQRVLRVKLENNPQYALYQPDGSVRGISADVVFQACEILLLKCELVSNGQETWE
SMFDDLQDKSIDILAPITISPQRKKLAYFSESYYRPQAILVKREHYKDDVYSNVSELVAE
RIGVIKDDFFEELLQQMLPNKILFSYASQEEKVQALLNKEIDYIVLNRANFNLLLRESKE
MLPIVEDTMIGSFYQYDIAIGFAKNPLGATLAPLFSRATKMLNTEQIIHTYDYQPNWRAT
LLAEKKYQRSTQWLFAMAFVVLLMVAFYLHGISHTDNLTKLRNRRALYNRYRRGLSPRLS
LVYLDVNMFKSINDQYGHEVGDKVLKQLAQRIETVWRGRSYRIGGDEFILIGECSTNRLE
HLVAQCERFMFVDTERDVSFEVSVAIGIAKNRERTESLNEVMHQADIAMYRSKAESTQSP
FQAASKVKGLHIV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgctacttaatgctttttcacgccgagccttactttggctaggttggctattgatttcc
accagcagtttagccgcaacgtcgccgacttataaagtcgccaccgaagcggatgatgtg
gtgactcgtgtgctatttgattcgattgctcactactttcaccttgaaattgaatacgtt
aattaccctagttttaacgatattctggtagcaatagagaccggcaatgctgattttgcg
gccaacattacttataccgatttgcgtgcccaacgctttgatttctcaagaccaaccaat
attgagtacacctatctctacggttatggtggcctacgtttacccgagctgcggcttgtg
ggcatcccgaaaggaaccatttacggaacattgttaaaggaacactatccctatatacag
caagtggagtatgaagggtatttagaagcgctcactttgctggaaagtggccgagtggac
ggagtggttgatgcgatcaatcagctcaaacctatgttaatcaaagggcttgatgcacaa
ctacttaacgatcaattaccgattcaacctgtctctatcgtgacgcctaaaggcaaacac
tcagcgctattggggaagattgaaaaatacgcgcactcgcctcacgtacaacgtttactt
cgtgaatcgatccaaaagtaccaattggacattcgcaaacaagctctgcgtcaagccgtg
gttgatagtggactcaatgcgcagcgtgtattgcgtgtcaagctggagaataacccgcaa
tatgcactttaccagcccgatggttctgtacgtggtattagtgctgatgtcgtttttcaa
gcttgtgagatactactgttgaaatgcgaattggtcagcaatggtcaagaaacatgggag
agtatgtttgatgatttgcaggataaaagcatcgatattttggctcctatcactatttct
ccacaacgtaaaaaacttgcctacttcagtgaaagctattatcgcccacaagcgattttg
gtcaaacgtgagcactataaagacgatgtgtatagcaatgtgtctgagttggtcgccgaa
cgtattggcgtcatcaaagacgacttttttgaagagctgttacagcaaatgctgccgaac
aagatcttgttcagctacgcaagtcaggaagagaaagttcaagccttactgaataaagaa
atcgattatatagtgctcaaccgagctaactttaaccttttgcttcgtgagtcaaaagag
atgttgccaattgtagaagacaccatgattggcagtttctaccaatatgacattgcgata
ggttttgctaaaaatccactgggtgcaaccctcgctccactgttttcccgggcaactaaa
atgctcaataccgaacagatcatacatacctatgattatcagccaaattggcgagccaca
ttacttgcggaaaagaaatatcagcgtagcactcaatggctctttgcgatggctttcgtt
gttctgcttatggtggcgttttatctacatggcatatctcataccgataaccttactaag
ctgcgcaatcgtcgtgctttatataaccgatatcgccgcggattatcacctcgtctaagc
ttggtttatcttgacgtgaatatgtttaaatcgatcaacgatcagtatggccatgaggtg
ggtgacaaggtactcaagcagttggcacagcgcatcgaaaccgtatggcgtggacgcagc
tatcggattggtggggatgaatttattttaatcggtgaatgctcaacaaatcggcttgaa
catttggtagcgcagtgtgagcgttttatgtttgttgatacagagcgcgatgtcagtttt
gaagtgagtgtggcgattggtattgccaagaaccgtgaacggaccgaatcactcaatgag
gtgatgcaccaagcggatattgcgatgtatcgctccaaggcggaatcgacgcaatcgcca
tttcaggcggccagcaaggtaaaaggattacacatcgtttaa
DBGET
integrated database retrieval system
