Vibrio paracholerae: SA104470976_00844
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Entry
SA104470976_00844 CDS
T08432
Symbol
oppF
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
vpl
Vibrio paracholerae
Pathway
vpl01501
beta-Lactam resistance
vpl02010
ABC transporters
vpl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SA104470976_00844 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SA104470976_00844 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SA104470976_00844 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_00844 (oppF)
Transporters [BR:
vpl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SA104470976_00844 (oppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
TniB
AAA
PRK
nSTAND1
nSTAND3
NACHT
RsgA_GTPase
AAA_5
AAA_13
ATP-synt_ab
NB-ARC
AAA_33
Sigma54_activat
ATPase_2
AAA_29
RNA_helicase
Zeta_toxin
DUF5906
AAA_16
AAA_19
DUF87
ATPase
Motif
Other DBs
NCBI-ProteinID:
SYZ80971
LinkDB
All DBs
Position
1:886416..887357
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AA seq
313 aa
AA seq
DB search
MSVEKKLLLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGK
STFARAIIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDI
IAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKP
KMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNA
VELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTR
CPQPRQSVRKPSQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagagaaaaaattattactggacgttaaagatcttaaagtccatttcaacatt
accccgaaatcggcatggccatggaccaaacccgttaccttgaaagcggtcgatggggtt
aacgtgcgtctgtatgaaggcgaaaccttaggggtagtgggtgagtccggttgtggtaaa
tcgacgtttgcacgcgccattattggtttggtgcaagcgactcacggtgaagtggtgtgg
ttaggccaggatttaacacgcatgcaggaagtcaaacgccgtgcaacgcgtaagcaaatc
caaatgatcttccaagaccctctggcatcgttaaacccgagaatgacggtcggtgatatc
attgccgagccactgcaaaccttctatcccgagctttccaagcaagaagtaaaagatcgg
gtaaaagagatgatggccaaggtagggttactgcctaacgtgatcaaccgttatccgcat
gagttttcaggcggtcagtgtcagcgtatcggtattgctcgcgcgctgatcctcaaacct
aagatgatcatctgtgatgaaccggtttccgctctagatgtgtcgattcaggctcaggtg
gttaaccttctcaaagagctgcaaaaagagctcggtttaagtctggtgttcatcgcgcac
gatctctcggtggtaaagcacatctcagatcgcgtgttggtcatgtatttgggcaatgcg
gtagagctgggcgtttctaaagagctgtttgctaaccctaaacacccttataccaaggca
ttaatgtctgcagtgcctattcctgaccccaacatcgaacgcaataagaccattcagatg
ttggaaggggatctgccttcaccgatgaacccgccatcgggttgtgtgtttcgcacccgt
tgcccgcagccacggcagagtgtgcgaaaaccaagccagtga
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