Vibrio paracholerae: SA104470976_01036
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Entry
SA104470976_01036 CDS
T08432
Symbol
polC_1
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl03030
DNA replication
vpl03430
Mismatch repair
vpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SA104470976_01036 (polC_1)
03430 Mismatch repair
SA104470976_01036 (polC_1)
03440 Homologous recombination
SA104470976_01036 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpl03032
]
SA104470976_01036 (polC_1)
03400 DNA repair and recombination proteins [BR:
vpl03400
]
SA104470976_01036 (polC_1)
Enzymes [BR:
vpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SA104470976_01036 (polC_1)
DNA replication proteins [BR:
vpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SA104470976_01036 (polC_1)
DNA repair and recombination proteins [BR:
vpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SA104470976_01036 (polC_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
CAF1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
SYZ81156
LinkDB
All DBs
Position
1:complement(1091846..1092547)
Genome browser
AA seq
233 aa
AA seq
DB search
MFDSAIYWPARFAHLAQQARQSSLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAKQDA
IVSIGLVPFTTQRIFLNQARYWLVKPSQPLEEESIVFHGITHSELQQARDPEQVLKELLE
ALHGKIVVVHFRHIEREFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIARRP
LPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAHHLPPHSAIQSLWL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattctgcgatttactggcccgctcggtttgctcacttagcccagcaggctcgg
caatccagtttacaacgcttttatgctcaacctctggttgaaggctcaacaccgattcat
cagtgctcactggttgccctcgattttgaaacaacgggactgaatgccaagcaagatgcc
attgtgagtatcggtttagtgccttttactactcaacgtatttttctcaatcaagctcgg
tattggttagtaaaaccctctcaaccacttgaagaggaatcgatagtgttccatgggatc
acgcactccgagttacaacaggcgcgagatccagaacaggtattgaaagaattactcgag
gcgttgcacggtaagattgtcgtcgtacactttaggcatattgaacgtgaatttttgcgc
cagattagcctgaatatatggggcgaggcgatcgaatttcccgtgctcgatacattagaa
attgaacgtcagttactggataaacaacgttcgctgtggcaacgcattgctcgtcgacct
ctgccctccatacgccttgggcaatcacggatgcgctatcacttaccgccctactcacct
caccatgcactgacggatgccattgcgaccgcagaactttttcaagcgcagtgcgcgcac
catctcccaccgcactccgccattcagtctctgtggctttag
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