Vibrio paracholerae: SA104470976_01102
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Entry
SA104470976_01102 CDS
T08432
Symbol
rlmI
Name
(GenBank) ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpl03009
]
SA104470976_01102 (rlmI)
Enzymes [BR:
vpl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
SA104470976_01102 (rlmI)
Ribosome biogenesis [BR:
vpl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SA104470976_01102 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
TRM
Methyltransf_15
MTS
PrmA
Methyltransf_25
Methyltransf_10
Motif
Other DBs
NCBI-ProteinID:
SYZ81221
LinkDB
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Position
1:complement(1173319..1174512)
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AA seq
397 aa
AA seq
DB search
MTPAIYLVKGRDKSLRRKHPWIFSRGISKVEGTPELGETIDVYSFEGKWLAKAAYSPHSQ
ITARVWSFTKQPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKYQ
DYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLEERVGVLYGELPPK
SVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKDKDVLNCFSYTGGFGLYALKG
GAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVIM
DPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAALD
AGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKVL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgcaatttatttggtcaaaggccgtgacaaatctttgcgtcgtaaacatcca
tggattttttctcgtgggatcagcaaagtcgaaggaactcctgaactgggagaaacgatc
gatgtttactcctttgaaggcaaatggttagccaaagccgcctactcaccgcattcacaa
attaccgcccgcgtatggagctttaccaagcagcccatcgatcgtgattttttcattaaa
cgtatcgagcaagcacagttgctacgtaacgacattattgaacgtgatggtttaaccggt
taccgtttaattgccgcggaatctgacggtttacccggcattactatcgataaatatcaa
gattacttggtgtgccaactactgagtgccggtgccgagtatcaaaagcaaactctggtc
gaggctttattacattgcttccctgagtgccatatttatgagcgttccgatgttgcggta
cgtaagaaagaaggcctagaagagcgcgtcggtgtactgtacggtgaattaccgccaaaa
tcggtcgtgattgaagaaaatggcgtcaaaatcagtgtcgatattgtcggcggacataaa
accggtttctatctggatcaacgcgatagccgcttccaatccatgaaatacgttaaagat
aaagacgtcctgaactgcttctcttacacgggggggtttggtttatacgcgctgaaaggt
ggagctaagcgtgtgatcaacgcggatgtatctcagccagccttggatacggctaaattc
aatgctgaactgaacggtttcgatatcagtaaaaaacgcgccgttttcttgaatgccgac
gtattcaaattactccgtgaataccgcgatcaaggcacacgttttgatgtagtaatcatg
gatccacccaaattcgccgaatccaaagctcaactggatggtgcatgtcgcggctataaa
gacatcaacatgctggccatgcagatcttaaacccaggtggcaccctgcttacctattca
tgttcgggtttgatggatcaagtactgttccagaaaatcattgctgatgcggcactcgac
gctgggagagatgtcaaattcgtggagcgttttgaacaagcggccgatcacccaaccgat
accgcttatcctgaaggtttttatctcaaaggctttgcttgtaaggttttataa
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