Vibrio paracholerae: SA104470976_01211
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Entry
SA104470976_01211 CDS
T08432
Symbol
rtxB
Name
(GenBank) RTX toxin transporter
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vpl
Vibrio paracholerae
Pathway
vpl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SA104470976_01211 (rtxB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_01211 (rtxB)
02044 Secretion system [BR:
vpl02044
]
SA104470976_01211 (rtxB)
Transporters [BR:
vpl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SA104470976_01211 (rtxB)
Secretion system [BR:
vpl02044
]
Type I secretion system
RTX toxin transporter
SA104470976_01211 (rtxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
AAA_16
SMC_N
AAA_22
DUF87
AAA_18
nSTAND3
ABC_ATPase
AAA_29
AAA_5
RsgA_GTPase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
SYZ81328
LinkDB
All DBs
Position
1:complement(1290319..1292427)
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AA seq
702 aa
AA seq
DB search
MISNNERLTLICIHFYLSIISANREKIKNESHLTDSENFKKELDKIQKDHKVKIRTKFSQ
FKNIESLKTPAILFDQHDLPFILAKANKGKCLIQRPNKETPEVLSSHELNSTWNKKSLVI
QQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTL
DVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAI
VTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWL
TPRMQVAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQ
QLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELW
GQFIQTRVAIEKLGDMLNLPVEQHTWSDNVTISGAISFKNILFRYQPDIPPTINHLSLDI
RAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQEN
FLFHKSVSENIAQSKPEASLEEIIEAAKLSGTHDFILKLPMGYDTVLAEGGQSLSGGQRQ
RLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDR
IIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEEASA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgatatccaacaatgaaagactcacgctgatatgcattcatttttatttaagtatcatc
agcgctaatcgagaaaaaataaaaaatgaaagtcatttaactgactctgaaaacttcaaa
aaagaactggataaaatacagaaagaccacaaggttaaaatacgtacaaagttttcacaa
tttaagaacatcgaatcactaaaaacacctgcaattttatttgatcagcacgacttacca
tttattctagcaaaagctaataaaggtaaatgtttaatacaaagacctaataaagaaact
cccgaagttctctcttctcacgaacttaattctacttggaataaaaaatcgttagtaata
cagcaagcacaatcgcgctttgatatcacttggttcattcctgaattcctccagcataaa
agagtgctgagcgaaattcttttattttcgttcgtactgcaaattctggctctgatctcc
cctctgttttttcaagtggtgatggataaagtgctggtccaccaagcttggtcgacgttg
gatgtactggtatttggtctagtgattacaggggtgatcgaagtggtgttacgcggattg
cgcgaatatcagtatgcccacaccgccaaccgaattgacatacagcttggacttaaactg
gtgcagcatctgtttgggctgccgctgatgttttttaaatcacgccaagtcggcgcgatt
gtcacgcgtgtgcgcgagctcgacaccattcgcgaatttttgactggctctatgtttacc
ttaacggtcgagctactgtttatgttcgtctttctttacgtcatgagcttactttctgct
ccgctcacagggctatttatcgccactgtgccctgttatgtccttctcgcttggtggctc
acaccaagaatgcaggtggcgattgaaaagcagttttcacatgctgcggcaaatacctca
tttctcactgaaaccgtagccggtagtgaaacgctgaaaagtttggcggttgagccgcga
tttatccgacgctgggacgaacaaaccgaaaaaatggtcacaacgggttatgatgtccag
cagcttaataaccgctctaaccatttagtgcagttgctgcaaaaaatcaccagcgtcgcc
attttatggctgggggcgacggaagtgctctcacttgagatgaccattggtcaactgatc
gctttcaacatgatgaccaaccacattgcgcagcccttagcgcggatggtcgagctgtgg
ggacaatttattcaaactcgggtcgccatcgagaagctcggcgatatgcttaacctgccg
gtagaacaacacacatggagtgacaatgtcactataagcggcgctattagtttcaaaaat
atcctctttcgttatcaaccggatattcctcctaccattaatcatttgtcgctagacatt
cgtgctggtgaaacattgggggtggtcggcacctcgggctcaggcaaaagcaccctcgcc
cgtctgttgttgcgactttatagtcctgagcaaggcagtattaccattgacggcattcca
ctcaatcacatcaatgttcaacaactcagacagcgagtgggtgtggtattgcaagagaac
tttttatttcacaaaagcgtgagtgaaaatattgcccaatctaagcctgaggcaagtttg
gaggagatcattgaggccgcaaaactctcgggcacacatgactttatcctcaaacttccc
atgggttacgacacagtattagcggaaggtggtcaatcgctttcaggtggtcaacggcag
cgtctcgcgattgcacgcacccttttatcagatccgaaagtgctgattttggatgaagca
accagtgcgctggatgacgaatctcaagccgtcattcaagccaatatggccagcattgcc
agaggccgtacggtgatcacgattgctcatcgcttgtctacagtgcgtgattgcgatcgc
atcatagtgcttcatcagggcacgattgttgagcaaggctcacaccaacaattactcgcc
tacggcaaacaatacaaacagttatggcagcttcagcaagagctcaaacaagaggaagcc
tccgcatga
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