Vibrio paracholerae: SA104470976_01317
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Entry
SA104470976_01317 CDS
T08432
Symbol
yfgF_1
Name
(GenBank) Diguanylate cyclase/phosphodiesterase domain 2 (EAL)
KO
K20963
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
SA104470976_01317 (yfgF_1)
Enzymes [BR:
vpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SA104470976_01317 (yfgF_1)
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GFIT
Motif
Pfam:
EAL
UBA_ARIH2_N
MFE-2_hydrat-2_N
Motif
Other DBs
NCBI-ProteinID:
SYZ81433
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All DBs
Position
1:1417497..1418351
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AA seq
284 aa
AA seq
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MNRIHPYQNELSDILRKQRITPLFQPIVHLASERAIGYESLSRGPQQSPLHTAGSLFEAA
EQCQRLPELEKICVHKAAAAWSSFEIDSQLFINLSPDMLLHSQQHQWELPQLMQRHRLSA
NQVVFEISERTPALQLDELKNSIQHLQAQGFSIAIDDMGSGYSGLKLWSELQPDFVKIDR
YFIHNIDSNPIKLKFVRSLVQLAEQLDCQLIAEGVETRSELLAIADLGIELVQGYLFGRP
QLTPQRIYHSQSFSSATVLNIESARTETPLQYLMFQDTPRMSAL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcatccacccctaccaaaatgaattgagtgatattttgcgcaaacagcgcatt
accccgctattccaacccattgtgcaccttgcgagcgagcgtgctatagggtacgagtcg
ctcagtcgaggccctcaacaaagtcctcttcatacggctggttctctgtttgaagcggct
gaacagtgccagcgattacccgagttagagaaaatttgtgtacacaaggctgcggcagct
tggtcaagctttgagatcgattcacagctttttatcaacctgagcccagatatgttgctg
cattcacagcagcatcagtgggaattaccacaattgatgcagcgtcaccgtctatccgcc
aatcaggtcgtgtttgaaatttctgagcgcacccctgcattgcagttggatgagttgaaa
aactcgattcaacatctacaagcacaaggattttcaatagcgattgatgatatgggctct
gggtattcaggattaaaactgtggtctgaattacagccggattttgtgaaaattgatcgc
tactttatccataacattgacagtaacccaatcaaactgaaatttgtgcgtagtttggta
caactggcagaacaacttgattgccaattaattgcagagggagtagaaacgcgctccgaa
cttttggccatagcggatttaggtatcgagttagtccaagggtatttattcggtcgccct
caacttacgcctcagcgaatatatcattcgcagagtttttcctctgccacggtcttaaac
atcgagtcagctcgtacagaaacgcctcttcagtacctaatgtttcaagatactccacgt
atgtctgcgttatag
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