Vibrio paracholerae: SA104470976_01352
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Entry
SA104470976_01352 CDS
T08432
Name
(GenBank) iron-regulated protein FrpC
Organism
vpl
Vibrio paracholerae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Cadherin_5
Big_9
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
SYZ81466
LinkDB
All DBs
Position
1:complement(1450754..1459834)
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AA seq
3026 aa
AA seq
DB search
MGIHALLSLANLAANQLLVIDRNGNVTIINAGEAVPEGAIILDPNSNKLMPEQEPLPVAQ
LVDAEGNAQPITDDIEQILAALEEGADPTALDDDLAPAAGGLQGSSITGSASIERDGAET
IASTQFDTSGFEAIGLSRTQSLSLLNLFQNGIPSTDVNIDIELSTPTIDLVASSDSGDSD
TDNLTNDTTPTFTLGNIDSDAVKVEVFNGTTLLGEATFVNGIWTFTANEGQLIEGINPIT
AKITDLSGNEKFSAVLDLTLDTIADSGEVIVNSITSDDVITETEKNQTITVTGSATGGDI
KTGDIVTAIINGNEYKGSVSEDGSWELSVSGSDLAVDTAFEVTVDSTDAAGNEVTSKGES
VHRFDDTPINVNIDIDPITSDSVINAQEVNSLVTVTGTVTGESFSSGVVTLTINGVEYTG
EVVDGKYSIEVKGSDLSADSDNVVDAKVDVVNTAGNIGSATSTEFYLVDTFARGTIKIDP
ITDDNVINKAESEGLVKVTGSVGADAMPGDQVTVVVNNVIYTTKVLNDYSWEVSVSGTDL
AQDNKITATVTGDDWAGNPFSGSGERGYLVDTKAGDSNAAPVVEISEDTNNDGVISSKEL
NGDIDVKVFLPAGAVAGDTITVSNGSTSTPIVLSVDDITAGHVTTTFPSPGEGNEIQVTA
TLSDQYGNVSKEGSDNATVDTVFINDGDYAPVVSIEDDANDDGVINKDELGNDNVQVSVS
VNGAELAKGGSVNLTISNGGDERSVTLSLNDEGKLVDAAGTEYTYANGTITWTETVAEGA
SIKVDATQTDRDGNVSKEGSDNATVDTVFINDGDYAPVVSIVDDANDDGVINKDELGNDN
VQVSVSVNGAELAKGGSVNLTISNGGDERSVTLSLNDEGKLVDAAGTEYTYANGTITWTE
TVAEGASIKVDATQTDRDGNVSKEGSDNATVDTVFINDGDYAPVVSIEDDANDDGVINKD
ELGNDNVQVSVSVYGAELAEGGSVNLTISNGGDERSVTLSLNDEGKLVDAAGTEYTYANG
TITWTETVAEGASIKVDATQTDRDGNVSKEGSDNATVDTVFINDGDYAPVVSIEDDANDD
GVINKDELGNDNVQVSVSVNGAELAGGGSVNLTISNGGDERSVTLSLNDEGKLVDAAGTE
YTYANGTITWTETVAEGASIKVDATQTDRDGNVSKEGSDNATVDTVFINDGDYAPVVSIE
DDANDDGVINKDELGNDNVQVSVSVYGAELAEGGSVNLTISNGGDERSVTLSLNDEGKLV
DAAGTEYTYANGTITWTETVAEGASIKVDATQTDRDGNVSKEGSDNATVDTVFINDGDYA
PVVSIVDDANDDGVINKDELGNDNVQVSVSVNGAELAKGGSVNLTISNGGDERSVTLSLN
DEGKLVDAAGTEYTYANGTITWTETVAEGASIKVDATQTDRDGNVSKEGSDNATVDTVFI
NDGDYAPVVSIEDDANDDGVINKDELGNDNVQVSVSVYGAELAEGGSVNLTISNGGDERS
VTLSLNDEGKLVDAAGTEYTYANGTITWTETVAEGASIKVDATQTDRDGNVSKEGSDNAT
VDTVFINDGDYAPVVSIVDDANDDGVINKDELGNDNVQVSVSVNGAELAKGGSVNLTISN
GGDERSVTLSLNDEGKLVDAAGTEYTYANGTITWTETVAEGASIKVDATQTDRDGNVSKE
GSDNATVDTVFINDGDYAPVVSIEDDANDDGVINKDELGNDNVQVSVSVNGAELAKGGSV
NLTISNGGDERSVTLSLNDEGKLVDAAGTEYTYANGTITWTETVAEGASIKVDATQTDRD
GNVSKEGSDNATVDTVFINDGDYAPVVSIVDDANDDGVINKDELGNDNVQVSVSVNGAEL
AKGGSVNLTISNGGDERSVTLSLNDEGKLVDAAGTEYTYANGTITWTETVAEGASIKVDA
TQTDRDGNVSKEGSDNATVDTLYGEDGDENGSITQPTVSITDNTGNNAELISGTEKANIT
VNFGEGVSSGTAVVVISDEDNTTGSITLTVTLANRVASVDGYEVVKNTDGTYTIKDVDVS
GQKDGKLTATATFTDQDGNTVNNITDDVQKDTDYGVAGNIGLPTVEITDNSGQPSGEELI
NAQEKADITVNFGAGVTSGSAQVVIQDIDGKTITLNISLSSDGNLIATGGDNTSYTVVNA
GSGYYTIKDIDVSGLKDGQLKANASFTDQDGNTAIAKPDDVHKDTVVSGEVDILSISPDN
RINIAELHGSVVITGTAKQDAKPGDLIEFFLGDKFVGKGVVSEQAIYQNGKQVGYEFAIT
VEGKNLVPDVLNGDTRSLELTAKLHVEDAAGNKAVSTNTEVYFLDIVAPKSPTITNVTDD
SPESDYSVVTLHGTGSEPSNKIEVFAKDANGEYVSIGTATVNSDLSWTLDISNVSSIPLN
DNEFLYTKETDSFGNVSEPSNVVHYYHGNYNPARTEATDDFVLLGKGDDLLIVDQDDANN
MLVADGGAGIDTAQFNFASTAASVVLNADGSVTITETNGDVNTFIEFENFKFTDGTKSFS
ELFAPTVTLERDGDDIIDSDRTTVGYTINLPVGAVVGATLLLVIEGKPTSRELIQVDIDA
GSITGSIQTSAINGNELSISAEIRYPNQPDNLEFKDNDSLNVNTLPDAKNDIISTDEGHG
VTIDVLANDTDAENETLSISSASVIEGKGTVSIVDGKLYFEPVDDDFSGKVEIEYVVTDP
QKGTSTAVVEVTVNPVADQPDLSLEAPQVTLPSHAFDVYKWDGVVVAPIYGNGNGVSGSE
LIKVIATLNKENATQSTMANAQDSSSYATSANQAVLLTGLVYLEAGVSYDFVGRGDDSLA
ITIGSKLVDEGRWGAGATLKGEAFVPTESGYYPISIYHHNQNGQGNFDVNVSIGGAVAVD
LSSSNLSIVSDLDSLTSSGIRTSGAKVDVNGFEFYDIYQVNEGRQDTAIPLSEIKASLND
NDGSETLSIALTGIPNGATISDGTNSVTITDNQSVDVTNWSLNSLVVTPPAGSHEDFKIK
VTATSTEKANNDQAESTVDIHVIVHE
NT seq
9081 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcatgctttgttgtctttagcaaatcttgcagcgaatcagctgcttgtgatt
gatagaaatggaaatgtcacgatcatcaacgcaggagaagccgttcctgaaggtgcgatt
atcctcgacccgaatagtaacaaattgatgccagagcaggagccactgcccgtagcacaa
ctggtggatgctgagggtaacgcccagccgattaccgacgatatagagcagattttagcc
gcattagaagaaggcgcagacccgactgcactagatgatgatctcgccccagcagcaggt
ggcctccaaggttcatcaatcacgggtagcgcctcaattgagcgtgatggtgctgaaacc
atcgcgtcaacacaatttgatacatccggcttcgaagccatcggcctatcaagaacgcaa
agcttgagtttgctgaatttgtttcagaatggaattccatctacagatgtaaatatcgat
atagagctcagtaccccgaccattgatctagttgcgtcgagcgatagcggtgatagcgat
acagacaacctgaccaacgatacaacgccgacgtttacgctcggtaacatcgatagtgat
gctgtaaaagtagaagtgttcaatggtacaaccctattgggtgaagcaacatttgttaat
ggcatatggacatttactgctaatgaggggcagttaatcgagggtataaaccccataaca
gccaaaataaccgatttgtcaggcaacgagaagttttctgccgtactagatcttactttg
gacaccatcgctgactctggcgaagtaattgttaattctattacttctgatgatgtgatt
acagaaacagagaaaaatcagaccattacagtgactggttcagcgacgggtggtgacatc
aaaactggagatattgttaccgcaatcattaacggcaacgaatacaaaggcagcgtttct
gaagacggttcgtgggaactatcagtaagcggttcagaccttgctgtagatactgctttt
gaagttaccgttgattctaccgatgcagcaggtaatgaagtcacgtctaaaggcgaatcg
gttcatagatttgatgatacgcctattaacgtgaacatagacattgatccaatcacctct
gactctgtgattaatgcccaagaagtaaactccttagtaacagtgaccggtacggtaact
ggagagtccttctcgtcaggcgttgttactcttactatcaatggcgttgaatacactggt
gaagttgtcgacggtaagtacagtatagaagttaagggctcagatttaagcgcagattca
gataatgtcgtcgatgccaaagtagatgttgtaaacacggcgggtaatattggttcagcg
acttctacggagttctacctagtcgatacgtttgcacgtggaacgatcaagatcgaccca
atcacagatgacaatgtgatcaacaaagcagaaagtgaaggtctagtaaaagtaacgggc
tcagttggtgcggatgcaatgcccggcgatcaagtaacggttgtagtgaacaacgtcata
tatacaaccaaggttttgaatgattactcatgggaagtttctgtttcaggtactgactta
gctcaagataacaaaattaccgctactgtaacgggagacgactgggcgggtaacccgttt
agcggctcgggtgagcgtgggtatttggtcgatacaaaagcgggcgacagcaacgcagcg
ccagtggttgagatcagcgaagataccaacaacgacggcgtgatcagctcgaaggaactc
aatggcgacatcgacgtgaaagtgttcttgccagcgggcgcggtagcgggtgacaccatc
accgtgagcaacggcagcaccagcacgccaatcgtgttgagcgtggatgacatcaccgca
ggtcatgtgaccaccacgtttccaagcccaggcgaaggcaacgaaatccaagtcacggcg
acgctgagcgaccagtacggcaacgtgtcgaaggaaggcagcgacaacgcgacggttgat
acggtgttcatcaatgacggtgactacgcaccggtcgtgagcatcgaggatgacgcgaac
gacgatggcgtgatcaacaaagacgagctgggtaacgacaacgttcaggtgagcgtatcg
gtgaacggtgcagagcttgcgaaaggcggttcagtgaacctgaccatcagcaatggtggc
gacgagcgcagtgtgacgttgagcctgaacgacgaaggcaagctggtcgatgcggctggc
acagaatacacgtacgcgaatggcaccatcacctggacagaaaccgtggccgagggcgcg
agcatcaaagtggatgcgacgcagaccgaccgcgacggcaacgtgtcgaaggaaggcagc
gacaacgcgacggttgatacggtgttcatcaatgacggtgactacgcaccggtcgtgagc
atcgtggatgacgcgaacgacgatggcgtgatcaacaaagacgagctgggtaacgacaac
gttcaggtgagcgtatcggtgaacggtgcagagcttgcgaaaggcggttcagtgaacctg
accatcagcaatggtggcgacgagcgcagtgtgacgttgagcctgaacgacgaaggcaag
ctggtcgatgcggctggcacagaatacacgtacgcgaatggcaccatcacctggacagaa
acagtggccgagggcgcgagcatcaaagtggatgcgacgcagaccgaccgcgacggcaac
gtgtcgaaggaaggcagcgacaacgcgacggttgatacggtgttcatcaatgacggtgac
tacgcaccggtcgtgagcatcgaggatgacgcgaacgacgatggcgtgatcaacaaagac
gagctgggtaacgacaacgttcaggtgagcgtatcggtgtacggtgcagagcttgcggaa
ggcggttcagtgaacctgaccatcagcaatggtggcgacgagcgcagtgtgacgttgagc
ctgaacgacgaaggcaagctggtcgatgcggctggcacagaatacacgtacgcgaatggc
accatcacctggacagaaaccgtggccgagggcgcgagcatcaaagtggatgcgacgcag
accgaccgcgacggcaacgtgtcgaaggaaggcagcgacaacgcgacggttgatacggtg
ttcatcaatgacggtgactacgcaccggtcgtgagcatcgaggatgacgcgaacgacgat
ggcgtgatcaacaaagacgagctgggtaacgacaacgttcaggtgagcgtatcggtgaac
ggtgcagagcttgcgggaggcggttcagtgaacctgaccatcagcaatggtggcgacgag
cgcagtgtgacgttgagcctgaacgacgaaggcaagctggtcgatgcggctggcacagaa
tacacgtacgcgaatggcaccatcacctggacagaaacagtggccgagggcgcgagcatc
aaagtggatgcgacgcagaccgaccgcgacggcaacgtgtcgaaggaaggcagcgacaac
gcgacggttgatacggtgttcatcaatgacggtgactacgcaccggtcgtgagcatcgag
gatgacgcgaacgacgatggcgtgatcaacaaagacgagctgggtaacgacaacgttcag
gtgagcgtatcggtgtacggtgcagagcttgcggaaggcggttcagtgaacctgaccatc
agcaatggtggcgacgagcgcagtgtgacgttgagcctgaacgacgaaggcaagctggtc
gatgcggctggcacagaatacacgtacgcgaatggcaccatcacctggacagaaaccgtg
gccgagggcgcgagcatcaaagtggatgcgacgcagaccgaccgcgacggcaacgtgtcg
aaggaaggcagcgacaacgcgacggttgatacggtgttcatcaatgacggtgactacgca
ccggtcgtgagcatcgtggatgacgcgaacgacgatggcgtgatcaacaaagacgagctg
ggtaacgacaacgttcaggtgagcgtatcggtgaacggtgcagagcttgcgaaaggcggt
tcagtgaacctgaccatcagcaatggtggcgacgagcgcagtgtgacgttgagcctgaac
gacgaaggcaagctggtcgatgcggctggcacagaatacacgtacgcgaatggcaccatc
acctggacagaaacagtggccgagggcgcgagcatcaaagtggatgcgacgcagaccgac
cgcgacggcaacgtgtcgaaggaaggcagcgacaacgcgacggttgatacggtgttcatc
aatgacggtgactacgcaccggtcgtgagcatcgaggatgacgcgaacgacgatggcgtg
atcaacaaagacgagctgggtaacgacaacgttcaggtgagcgtatcggtgtacggtgca
gagcttgcggaaggcggttcagtgaacctgaccatcagcaatggtggcgacgagcgcagt
gtgacgttgagcctgaacgacgaaggcaagctggtcgatgcggctggcacagaatacacg
tacgcgaatggcaccatcacctggacagaaaccgtggccgagggcgcgagcatcaaagtg
gatgcgacgcagaccgaccgcgacggcaacgtgtcgaaggaaggcagcgacaacgcgacg
gttgatacggtgttcatcaatgacggtgactacgcaccggtcgtgagcatcgtggatgac
gcgaacgacgatggcgtgatcaacaaagacgagctgggtaacgacaacgttcaggtgagc
gtatcggtgaacggtgcagagcttgcgaaaggcggttcagtgaacctgaccatcagcaat
ggtggcgacgagcgcagtgtgacgttgagcctgaacgacgaaggcaagctggtcgatgcg
gctggcacagaatacacgtacgcgaatggcaccatcacctggacagaaaccgtggccgag
ggcgcgagcatcaaagtggatgcgacgcagaccgaccgcgacggcaacgtgtcgaaggaa
ggcagcgacaacgcgacggttgatacggtgttcatcaatgacggtgactacgcaccggtc
gtgagcatcgaggatgacgcgaacgacgatggcgtgatcaacaaagacgagctgggtaac
gacaacgttcaggtgagcgtatcggtgaacggtgcagagcttgcgaaaggcggttcagtg
aacctgaccatcagcaatggtggcgacgagcgcagtgtgacgttgagcctgaacgacgaa
ggcaagctggtcgatgcggctggcacagaatacacgtacgcgaatggcaccatcacctgg
acagaaaccgtggccgagggcgcgagcatcaaagtggatgcgacgcagaccgaccgcgac
ggcaacgtgtcgaaggaaggcagcgacaacgcgacggttgatacggtgttcatcaatgac
ggtgactacgcaccggtcgtgagcatcgtggatgacgcgaacgacgatggcgtgatcaac
aaagacgagctgggtaacgacaacgttcaggtgagcgtatcggtgaacggtgcagagctt
gcgaaaggcggttcagtgaacctgaccatcagcaatggtggcgacgagcgcagtgtgacg
ttgagcctgaacgacgaaggcaagctggtcgatgcggctggcacagaatacacgtacgcg
aatggcaccatcacctggacagaaacagtggccgagggcgcgagcatcaaagtggatgcg
acgcagaccgaccgcgacggcaacgtgtcgaaggaaggcagcgacaacgcgacggttgat
acgctatacggtgaagacggcgacgagaatggcagcatcacgcaaccaacggtgagcatc
acagataacacgggcaataatgctgagctcatcagtggcacagaaaaagcgaacatcacg
gtgaacttcggtgagggcgtgagctcaggcactgcggtggtggtcatcagcgatgaagac
aacacgaccggctccatcaccttgacggtgaccctggccaatagggtggcgagcgtggac
ggttacgaggtggtgaagaacacggatgggacgtacaccatcaaagacgtggacgtgagc
ggccagaaagatggcaagttgacggcgacggcgacgttcactgaccaagatggcaacacg
gtgaataacatcaccgatgatgttcagaaagacactgactacggcgtcgcaggtaacatt
ggtttaccgacagttgaaattaccgacaacagtgggcagccatctggtgaagagctaatc
aatgcccaagagaaagcggacatcacagtaaacttcggcgctggtgttacttcaggttca
gcgcaggttgttatccaagatattgacggtaaaacgattactttgaacatttcactaagt
agcgatggtaacttaattgctactggtggtgataacacgtcctatacagtggtcaacgct
ggtagtggttattacaccatcaaagatatcgatgttagtggcctgaaggacggtcagcta
aaagccaatgcgtcgttcactgaccaagatggcaacacggcgattgctaagcctgatgac
gtgcataaagatactgtagtgtctggcgaagtcgatatcttgtctatctcaccggataac
cgtattaacattgctgaattacatggttctgtcgttattacaggtacagcaaaacaagac
gccaagcccggtgatttgattgagtttttccttggtgacaagtttgttgggaaaggcgtg
gtctctgagcaagccatttatcaaaatggtaagcaggttggttatgaattcgcaattaca
gtcgaaggcaaaaatctagtcccagacgttttaaatggtgacactcgtagtttagagcta
accgctaagcttcacgttgaagatgctgctggtaataaagcggtttcaacaaacacagag
gtttacttcttagatatcgttgctcctaaatcaccaaccattacaaatgtcactgacgat
tcgccagagtctgattattcagtggttactctgcatggcaccggtagtgaaccgagcaac
aagattgaagtatttgctaaagatgcgaatggtgaatacgtttctatcggtacagcgacg
gtcaattcagacttgtcctggacacttgacatttcaaatgtgtcatctattccattgaat
gacaatgagttcttatacacgaaagagactgactcctttggcaacgttagcgaaccatcg
aatgtggttcactactatcacggcaactacaatccagcgcgtactgaggcaaccgatgac
tttgtgttgttgggtaaaggcgatgatttactgatcgttgaccaagatgatgccaacaat
atgttggttgctgatggcggtgccggtatcgatactgcgcagtttaattttgcctctaca
gctgcctcggttgttctcaatgctgatggttcggtgacaatcactgaaactaatggtgat
gtgaacacctttattgagttcgaaaactttaagtttaccgatggtactaagagcttctct
gagctttttgcaccgactgtcactttagagcgcgatggtgatgacatcattgatagtgat
agaaccaccgtgggttacaccattaatttaccagttggtgctgtcgttggtgcaacgttg
ctgcttgttatagaaggaaaacccacttctagagaactcatccaagtagacattgacgct
ggaagcataacaggaagcattcaaacctcagctatcaacggtaatgagctgtctatttct
gctgaaattcgttatccgaatcagccggacaatctcgagtttaaagataacgattcgttg
aatgtaaatactttgcctgatgcgaaaaatgacatcatttcgaccgatgaaggtcacggt
gtaacgattgatgttctagcgaatgatactgacgcggagaacgaaacattatcgatttcc
tcggcctccgttattgaagggaaagggacggttagtatcgttgatgggaaactctatttt
gagccagtagacgatgatttttcaggtaaagtggaaattgagtacgtggtgacggatcca
caaaagggcacttcaacagcggttgttgaagtgacggtgaatcctgttgcagaccagccg
gacctatcgctagaggcaccccaagtgacccttccatcccacgcctttgatgtctataaa
tgggatggcgtggttgtcgccccgatatatggcaatggcaatggtgttagtggttctgaa
cttattaaagtgatcgccactcttaataaggaaaatgctactcaaagcacgatggctaat
gcacaagactcttcaagctatgcgacatctgcaaatcaagcagtgctgcttactggactg
gtataccttgaggctggcgtttcctatgattttgtggggcgaggggatgacagtttagcg
atcacaatcggcagcaaacttgttgatgaggggcgctggggcgctggtgctacgcttaaa
ggggaggcatttgttcctacggaatcgggctattatcccatttcgatttatcaccacaac
caaaatggacaaggtaactttgatgttaatgtttccattggtggtgcggtagcggtggat
ctcagcagcagtaatctgtctattgtctctgatcttgattcgttaacctcttctggtatt
cgaacttcaggggcaaaagtggatgtaaacggttttgagttctacgacatttatcaagtc
aatgaaggtcgtcaggatacggcgataccactttcagaaattaaagcttcgttgaatgac
aatgatggttctgaaaccttatcgattgcacttacaggcattcccaatggggcaactatc
tctgatggtacgaatagtgtcacgattactgacaatcagagtgttgatgtcaccaactgg
tcattaaactctttagtggtcactccaccagctggtagccatgaagacttcaagatcaag
gtgacagcaacaagcactgagaaagctaataatgatcaggctgaatcaacggtcgatatc
cacgttatcgttcatgagtag
DBGET
integrated database retrieval system
