Vibrio paracholerae: SA104470976_01368
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Entry
SA104470976_01368 CDS
T08432
Name
(GenBank) helicase-like protein
KO
K19789
DNA repair protein RadD
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpl03400
]
SA104470976_01368
DNA repair and recombination proteins [BR:
vpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SA104470976_01368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
DZR
AAA_22
AAA
DUF7577
P-loop_SecA
zf-tcix
Zn_ribbon_3
MgtE_N
AAA_16
AAA_30
FAD_binding_4
T1R_D3-like
Motif
Other DBs
NCBI-ProteinID:
SYZ81482
LinkDB
All DBs
Position
1:1480299..1482083
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AA seq
594 aa
AA seq
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MYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHR
VPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC
IFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI
VAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDAPTPERDRIIQAFKQQQI
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETG
EREHCGYRFRAKYCNECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECTDMS
LKAHKDAKGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAAT
PAKVVDHQHRFRPPLFVIARKSGRFWAIRDKVFADEFASPTDVHLSNRAYTIPT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgttacgaccttatcaagccgactcagtgaaagccgtcgtgcactattttcgc
cagcactctactccggccgtgattgtgcttccgaccggcgcaggaaaaagcttagtgatc
gcagagctggcgcgccttgcccgtggccgcgtattggtgttggcccatgtcaaagagttg
gttgagcaaaaccacgccaaatatgaaggctatggcttaactggcgcgattttttccgca
ggcttggggcgcaaagaaaccgatcaacaagtggtgtttgcctctgtgcaatcggtggtg
cgcaacttatccgagttccaaaaccagttctctttattggtgattgatgaatgccaccgc
gtccccgatgacaaaaacagcagttatcaaaaagtgatcacccatttgctggaactcaat
ccgggcatgaaagtgctcggactgaccgcaaccccctatcggctcgggatgggatggatt
taccagtatcacacccgtggtttagtgcgcagtgaagagccgcgttttttccgcgactgt
atttttgagctacccattcactatttattggatgaaggttttctcacccccgctcaattg
attgatacccccgtcatgagctatgacttttcgcagttgaaaccggccaataccgggcgc
tatcgtgaatcagaactcgacttggtgattgagcagtcacagcgcgccactccgcaaatt
gttgcccagatcattgagcttgctaaagcgcgacaaggggtgatgatttttgcagcgacc
gtgcgtcacgccgaagagatctaccgtttactgcctaccgaacacgccgccttagtgatc
ggtgatgccccgacgccagagcgtgatcgcattatccaagcgttcaaacagcaacagatt
aagtttttggtcaatgtttccgtactcactaccggatttgatgcgccgcatgtcgatttg
attgcgattttaaggccaaccgaatcggtcagtctctatcaacaaattgtcggccgcggg
ctacgccttgcggcgggcaaatccgactgtttggtgctcgactatgcgggtaatcagtac
gatctgtatcaacctgaagtgggcgatccgaaacccgattcagacagcgaaatcatcacc
attccctgccccgcttgcggttttaacaataacttttggggcaagctggatgcgaacggc
tttctgattgagcactatggccgccgctgccaaggctatttcaccgatgatgagacgggt
gagcgcgagcattgtggttaccgttttcgtgcgaaatactgcaatgaatgtggtgcagat
aacgacatcgccgctcgcatctgccatgagtgtgacgccacgttagtggaccccgataag
aaactcaaagaggcactcaatcttaaagatgcgctggtgtttgaatgtaccgacatgagc
ctaaaggctcataaagacgccaaagggaaaagccagcttcaagtgacttaccacgggcaa
gatgcggtgcaagtacaccagttttggccactgaatacgccgcgccaaaagcagcaattt
cacgaccaatttgtacgtccacatctggctgacaaacatcggccttttgaggcagcaacg
cccgccaaagtcgtggatcatcagcaccgttttcggccacccctgtttgtgattgcgcga
aaatcgggccgcttttgggccattcgagacaaagtatttgccgatgagttcgcctcccca
accgacgttcacttatcaaaccgagcttataccattcctacttga
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