Vibrio paracholerae: SA104470976_01567
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Entry
SA104470976_01567 CDS
T08432
Symbol
ompT
Name
(GenBank) ompT protein
KO
K10940
outer membrane protein OmpT
Organism
vpl
Vibrio paracholerae
Pathway
vpl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
SA104470976_01567 (ompT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_01567 (ompT)
Transporters [BR:
vpl02000
]
Other transporters
Pores ion channels [TC:
1
]
SA104470976_01567 (ompT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
DUF2490
Motif
Other DBs
NCBI-ProteinID:
SYZ81677
LinkDB
All DBs
Position
1:complement(1699582..1700631)
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AA seq
349 aa
AA seq
DB search
MKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQLRTEAKSVEKSEENKATGKYEMVRK
DLTLGSGSSRAGVDANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKTNFGKFSFGKQ
WTTSDDVSGADYSYFFGGTGLRFGTLSDALHDSQIKYVYEADNFWVKAGYGLTEDDANQE
LAELFVGATFGDLAVHAGVGQNTDKKFAAGTTAIDVTNTYFEVTGEYTIGDALVGVTYYN
AELDVNNNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQKANTGADEDGTLVYLGVEYQ
FASWARVYAEYGYGDGTTLGYTNKDSDADVKATKVDSANNFGIGARIYW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctctgtaaacgcagct
gaaattctaaaatcagacgcaggtaccgttgatttttacggtcagttgcgtaccgaagct
aaatcggtagaaaaatcagaggaaaataaggcaactggcaaatatgaaatggtaagaaaa
gacttgaccctaggttctgggtcttctcgcgctggtgtcgatgcaaactacaccgttaat
gatagcttagcgttacaaggcaaagtggaattcgcactaaaagatagtggcgatatgtat
gttcgtaaccacattcttggcgtaaaaactaattttggtaagtttagctttggtaagcaa
tggactacatctgacgatgtatccggtgctgactactcttatttcttcggtggtacaggt
cttcgcttcggcactttgtccgatgcactacacgattctcaaatcaagtatgtatacgaa
gcggataacttctgggttaaggcaggttatggcttaacagaagatgatgctaatcaagag
ctagcagagttatttgttggtgcaacctttggtgatctggctgttcatgccggtgttggc
caaaacactgataagaaatttgcggcaggaactaccgctattgatgtaactaacacttat
tttgaagtaactggcgagtacacaattggcgacgctctagttggagtaacatactacaac
gctgaactagatgttaataataacccattagttattgatgaagacgctatttctgtcgct
ggtacatacaaagttgctgacaagacaaaattgtatgctggctatgagtatgtaatgcaa
aaagcgaacactggcgcagatgaagatggtactctggtttacctaggtgttgaataccaa
tttgcaagctgggctcgtgtatatgctgaatatggctacggcgatggtacaactttgggt
tacaccaacaaggattctgacgcagacgttaaagcaacgaaagtggacagcgctaataac
tttggtattggtgctcgtatctactggtaa
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