Vibrio paracholerae: SA104470976_01580
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Entry
SA104470976_01580 CDS
T08432
Name
(GenBank) exonuclease
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00540
Lipopolysaccharide biosynthesis
vpl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SA104470976_01580
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpl01005
]
SA104470976_01580
Lipopolysaccharide biosynthesis proteins [BR:
vpl01005
]
Lipid A
SA104470976_01580
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
SYZ81690
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All DBs
Position
1:1716268..1717254
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AA seq
328 aa
AA seq
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MKSIRYLPLLFISTYAAAAQTSTFSLSIDNDGVFGVDQNYTNGLFLSYTSGAITPYWLAK
PLSLSIWGAPSLDKWEFTLGHKMWTPSDIELTKPQPNERPYAGYLHTEFNYLSLHPQQAQ
RFNLTLGMTGESALSEEAQKLVHSITKSDEPNGWAYQVEDQLVGSLGYRSHFNWGRYHAL
AGTELELANISEVNIGNFRSDLSSGLMLRWGTDLENNFGAAQISVENPFTPGMIGASNRG
WFVFTGIEGRYRFNDVTIEGDRPLNGLDQPAEYYQVHVEPLQATAVVGFAMYARSFGASL
TLTANTPEFKEDKESISGTGNVALYAFF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgattcgctatttacctttactgttcatcagtacttacgcggctgcggcgcag
acttcaaccttctctttgagcatcgataacgacggtgtattcggggtagatcaaaattac
accaatggccttttcctgagctatacatctggcgccattaccccttattggcttgcaaaa
ccgctcagtttatccatttggggcgctcccagtctggacaaatgggaattcacccttggg
cataaaatgtggacaccttctgatattgaattgaccaaaccacagccgaacgaacgccct
tatgcaggttatctacacactgaattcaattacctcagcctacatccacaacaagcacaa
cgctttaatctcaccttagggatgacaggagaaagcgctttgtcagaagaagcgcaaaaa
ttagtgcacagcattacgaaatccgatgagcccaatggctgggcataccaagtggaagat
caattggtgggtagcctaggttatcgctcccattttaactggggtcgctaccatgcttta
gccggtacagagttagagctggccaatatttctgaagtcaatatcggcaactttcgcagt
gatctttcctctgggctcatgttgcgctggggcaccgatttagaaaacaactttggcgca
gcccaaatttcggttgagaatccgtttactcccggcatgattggggcatccaaccgaggc
tggtttgtgttcaccggtatcgagggtcgctatcgatttaacgatgtgacaattgaaggt
gacagaccgctgaatggcttagatcaaccagccgaatattaccaagtgcatgttgaaccg
ttgcaagccactgctgtggtcggttttgctatgtatgctcgtagttttggagccagttta
accctcaccgctaacactcctgaatttaaagaagataaagagtcgattagcggtactggt
aacgtggctctgtacgctttcttctaa
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