Vibrio paracholerae: SA104470976_01835
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Entry
SA104470976_01835 CDS
T08432
Symbol
stcE_1
Name
(GenBank) hemolysin-like protein
KO
K20952
rugosity and biofilm structure modulator C
Organism
vpl
Vibrio paracholerae
Pathway
vpl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
SA104470976_01835 (stcE_1)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prism_lec
Crystall_4
FG-GAP_3
FG-GAP
PHA_synth_III_E
Beta-prop_BBS7
Motif
Other DBs
NCBI-ProteinID:
SYZ81941
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Position
1:complement(1996858..1999731)
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AA seq
957 aa
AA seq
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MTSQYIALAVGLLSLSSTVAQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHP
VDVQAPSGVSVMLSDWDNLSYNRLAVFNRYTGNEDLKNVKAENGAYLDFSKPRSMRVLAS
ETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDVEAPLGLGVMLSDWDNLSYNR
LAVFGGNTQNEQMRATKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPN
SNQVMVTPVVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYTNGGLVRALSGVDGSELWSY
ANGGVIADARYSPAVGDLDGDGIVEIVTTNNRDQFITILDNQGNIKKQIPTTESGWRIVG
DITLADLDHDGSVEILAADGVYNYHTGLVFNHPWAPSSINVDVDGDQQQEVFSGGTLFQN
NGAINWQYQANDAVWFSSLVNLDNDPEPEIVASVPASAATGHNARIAVLEHDGTIKWEIN
NTANPGGGVQAVSNFLGKAQAVETSEFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDA
IGASASTLIGGTGGNLNAAVNVKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSK
NYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELATQNGTNDLDVKGIVYAGYAAV
DMYNSKGERVWSVANDDAGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASL
AHSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSAKPWKNATRIW
NQHAFHLTNINQDGTLPTFVEPSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQAQRVVTA
DNQMYLRSGFAIDAIGTTANNLVGGPVQGTNGGVLRAPIALDQLQSVEVTSGLYNWGGYH
VVAIKFTMKDGSNVLFGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFIY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcaatatattgcacttgctgtcggtcttttatcgttaagcagtacagtggct
caagccacaacgaatgaagccgaagggtgtattatcagccgcctgaatggcgaaaaatat
tgtttaaaagtgggagagcgttcgggatactccctccctagctggatttatgctcatcct
gtagatgtacaggctccgagtggtgtctctgtcatgctaagtgattgggataacctgtct
tataaccgtttggcggtgttcaatcgctataccggcaacgaagatcttaagaatgttaaa
gccgaaaacggtgcttacttagatttttctaaaccacgctcaatgcgagtactggcttct
gaaacttatcctgaggcttgtattgtgagtcgccaaacgggtgaacgtttctgtttaaaa
gagggtgagcgctctggttactcgttaccagcgtacatttatggccatgaggttgatgtt
gaagcacctctaggtttgggtgtcatgctgagtgattgggataacctttcatacaaccgt
cttgcagtgttcggtggtaacacccagaacgagcaaatgcgtgcaaccaaagcctacaat
ggcgaaacgcttgatttctcaaaaccacgctcaatgcgcgttgtcccttatgacggtgac
agctcggcacttaatatgaagcttaagtggtcttggcaaggtagtgctttccaacctaat
tctaaccaagtgatggttacgcctgttgtcgcgcaactgaacgatgacaatggtgatggc
aagattgatgaaaaagatgtcgcagatttgatcgtggtgacatttgaaggaaacaaatac
accaatggcggcttagtgcgtgctttaagtggtgtggatggttctgagctgtggagctat
gcgaatggtggtgtgatcgcggatgcgcgttattccccagcggtaggcgatctggatggt
gacggaatcgttgagattgtgacaaccaataatcgcgatcaattcattacgattttggat
aaccaaggcaacatcaaaaaacagatcccaaccacagaaagtggctggcggattgttggt
gatatcacgttggcggatttggaccatgatggcagtgtagaaattctggctgcagatggt
gtgtataactaccacactggactggtttttaatcacccttgggcgccgtcatcgatcaac
gtcgatgtcgatggcgatcagcaacaagaagttttttcaggtggtactctgttccaaaat
aacggcgcgatcaattggcagtatcaagcaaacgatgcggtttggttctcttcattagtt
aatttagataatgatcctgaacctgaaattgtcgcttcggttcctgcttctgcagcaacg
ggacataatgcacgtattgctgtactagaacacgatggcaccattaaatgggaaatcaac
aatactgcgaaccctggtggtggcgtgcaggcggtatctaactttttaggcaaagctcaa
gcagttgaaacgagtgagttctcaaaagtctatggttatcagcctaataacaatcctgct
tcgattgctttggccgttgatggcaagatctctgttcgttcaggattcgcgattgatgcg
attggtgcttctgcttcgacgttaatcggtggcacgggaggcaaccttaatgccgcggtt
aacgtcaaagatattaaagcgattgacctgacttggggtaaatactattggggcggttat
catttattggcgctcgattttagaatgagcaacggtagcgtgatttctatgggctctaaa
aactatgcttactctaagcagaccgagcgctttactgtaccagcgggtagccgcattaaa
ggcatcaaagcttggaccgcgggttggctgttggacggtgttcaatttgagttagctacg
caaaatggtaccaatgatctggatgtaaaagggattgtttacgcaggctatgccgctgtc
gatatgtataacagcaaaggcgagcgtgtctggtctgtggcgaatgacgacgctggtagc
ggaaaaattggtgtctctgcgtatgactttgataacgatggcatcgatgaagtgctcgtg
caagatcatgcacgcgtgcgtgtattagatggcaaaacgggcaaagaacgtgcatcgcta
gcacactccacggcaacactttgggaatatcctatcgtggtcgatctggaaggtgataac
aacgcagagttgatcgtggcagcgaacgatttcgatcgccaatattcgattaaccatggg
gtttatgtttaccaatctgcggacagtgcgaaaccttggaagaatgcgactcgtatttgg
aaccagcatgctttccatctgaccaacatcaatcaagatggtactttgccgacttttgtt
gagccaagttggttgagccataatacgtatcgctcaagcacattacgcgctgcagtgggt
ggtgagtctccaattttcggttactcaaatactcagcaagcgcaacgtgtcgtgacggcg
gataaccagatgtatctgcgttcaggttttgcgatcgatgccattggtactaccgccaac
aacttggtaggcgggccggtgcaaggcactaacggtggtgtgttaagagcaccgattgca
cttgatcaattgcaatcagttgaagtcacctcggggctttataactggggtggttaccac
gtagtggctattaagttcacgatgaaggatggctctaatgtgttatttggttcaacccac
tatgcgagcaataagaaagtggaaacatacacagtgcctcaaggtaaacgtatcaaacag
attaatgtatggaccggtggttggttagtggaaggcttccagttcatctactaa
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