Vibrio paracholerae: SA104470976_02080
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Entry
SA104470976_02080 CDS
T08432
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpl03016
]
SA104470976_02080 (truB)
Enzymes [BR:
vpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SA104470976_02080 (truB)
Transfer RNA biogenesis [BR:
vpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SA104470976_02080 (truB)
Prokaryotic type
SA104470976_02080 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
SYZ82171
LinkDB
All DBs
Position
1:complement(2264498..2265436)
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AA seq
312 aa
AA seq
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MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVQVDHDTLLACIAKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLL
LPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPTDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacacactggcgcgcttgatcctttggcgacgggcatgttgccaatctgtctcggcgaa
gccactaagttttcccaatttctgctcgattctgataagcgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgatacgtcagactctgatggtcaagtggtacaaacccgtcctgtt
caggtggatcacgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaa
gttccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgt
cagggcattgaagttccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcat
cgctttgaaggtgatgaagttgagatggaagtgcactgctcgaaaggcacttacatccgt
accatagtcgatgatctgggtgaaatgctgggctgtggagcacatgtgaccatgctgcgc
cgtgtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgct
ttggttgaacaagcccatcgtgacgaaaaagcggtggctgacgttctcgatccgctattg
ctgccgatggatactgccgtggaagctttacctgaagtcaacgtgatcccagaactgatg
acactgattcagcatgggcaagcagtacaggtttcgggtgcaccaaccgatggcatggtg
cgcattactggcggtgagcagaagctattccttggcgttggcgagattgacgataacggt
aaggtcgcgccgaaacgcttggtggtgtacggcgaataa
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