Vibrio paracholerae: SA104470976_02108
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Entry
SA104470976_02108 CDS
T08432
Symbol
appA_1
Name
(GenBank) peptide/nickel transport system substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vpl
Vibrio paracholerae
Pathway
vpl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SA104470976_02108 (appA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_02108 (appA_1)
Transporters [BR:
vpl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SA104470976_02108 (appA_1)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
SYZ82196
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All DBs
Position
1:2296578..2298248
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AA seq
556 aa
AA seq
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MLANIKKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDFI
YEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLL
KAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDVKDPTT
FTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNS
ELDWTSSFVPDIDRTYAAANPNHHYWYPASGTQAFMVNFKNPDPAKKEALTNVDFRRAFS
MALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGAKKLLAKA
GFKDVNGDGFVDTPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKARARTPEFAVY
NQAMLEGTYDVAYTNYFHGADPYTYFNSAYNSALQSGDGMPRFAMHFFTDKKLDGLLDSF
YKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNTTRFTGWWSEENPKGRPSIWA
GIPERLLHVLDLKPVK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaatattaaaaagacagcactagccgccgcagtaatcgcagcagcaaccagt
gtttcagctccagcgtttgcacgtagtgagctcaccatcgtgccagatttctaccctaca
atggtacgtaacttcaacccgtacctagcgactaacctgcgtacaaccactgactttatc
tatgagcctctggttgtattcaatgaaatgaaaggtaatacgcctgttttccgtctggca
gaaagctacaaaatggctgacgacctgatgagcgtgactttcgatatccgcaaaggcgtt
aagtggtctgacggtgaagcattcacagctgacgacgtggtttactctttcggcctgctg
aaagcgaaaccagaacttgatcaacgtggtatcaacaagtgggttaccagcgttgagaaa
gttgacgaatacaaagtgcgtttccgtttgtctgaagcaaactcaaacgtaccttatgaa
atttctctgatccctatcgttgctgagcacgtgtggaaagacgtgaaagatccaaccacc
ttcactaacgaaaatccagtaggtactggtcctttcaccgtgatcgacactttcactcca
caactgtacatccagtgtcgtaacccgaactactgggatgcagcgaacctagaagttgac
tgtctgcgtgttccacaaatcgcaaacaacgaccaactactgggcaaaatcgtaaactct
gaactcgactggacttcttcattcgttccagatattgaccgtacttacgccgctgcgaac
cctaaccaccattactggtacccagcatcaggtactcaggcattcatggtaaacttcaag
aacccagatccagcgaaaaaagaagcattgactaacgtagatttccgtcgtgcattctct
atggctctggatcgtcaaaccatcattgacatcgcattctacggcagcggtacagtgaat
gacttcgcatctggccttggctacgcattcgaagcatggtctgatgaagcgacccacaaa
aagtacaaaggcttcaacacttatgacgttgaaggcgcgaaaaaactactggcaaaagca
ggcttcaaagatgtgaatggtgacggctttgttgacaccccatcaggcaagtcttttgaa
ctgctgatccaatctccaaacggctggactgactttaacaacacagttcaactggcggtt
gagcagctacaagaagtgggtatcaaggctcgtgctcgtactccagaattcgcggtttac
aaccaagcaatgctggaaggtacttacgatgtggcttacaccaactacttccatggtgcg
gatccttacacttacttcaatagcgcttacaactcagcactacaatctggtgacggtatg
ccacgctttgcgatgcacttcttcaccgacaagaagctcgatggtttgctagacagcttc
tacaaaacagcggacaagaacgagcagttagcgatcgctcatggtattcagaagatcatt
gctgaaaaccaagtgactatccctgtaatgtctggtgcatggatgtatcagtacaacacc
actcgtttcactggctggtggagcgaagaaaatccgaagggccgtccaagcatttgggct
ggtatcccagagcgtctactacacgtactggatctgaaaccagttaagtaa
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