Vibrio paracholerae: SA104470976_02141
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Entry
SA104470976_02141 CDS
T08432
Symbol
hapR
Name
(GenBank) hemagglutinin/protease regulatory protein
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
vpl
Vibrio paracholerae
Pathway
vpl02020
Two-component system
vpl02024
Quorum sensing
vpl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SA104470976_02141 (hapR)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SA104470976_02141 (hapR)
05111 Biofilm formation - Vibrio cholerae
SA104470976_02141 (hapR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpl03000
]
SA104470976_02141 (hapR)
Transcription factors [BR:
vpl03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SA104470976_02141 (hapR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_11
LacI
Motif
Other DBs
NCBI-ProteinID:
SYZ82229
LinkDB
All DBs
Position
1:2340732..2341343
Genome browser
AA seq
203 aa
AA seq
DB search
MDASIEKRPRTLLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPT
REDLVDDVLNFVVRQYSNFLTDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSA
STRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDVDNMASLFHGIFYSIFLQVNR
LGEQEAVYKLVDSYLNMLCIYKN
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcaatcgaaaaacgccctcgaactctgctgtcgcctcaaaaacgtaaacta
caactgatggaaatcgcgttggaagtatttgctaaacgtggcattggtcgcggtggtcac
gctgatattgccgagattgcgcaagtctccgtagcaaccgtgttcaactacttcccaact
cgcgaagatctcgtcgacgatgtgctgaattttgtggttcgtcagtactccaacttcttg
accgatcacatcgatcttgatttggatgtgaaaaccaacctacaaaccctgtgcaaagag
atggtgaaattggcgatgactgattgtcactggctcaaagtctggtttgagtggagtgct
tcaacccgtgacgaagtttggccactgtttgtatccaccaaccgtacgaaccaactgctg
atcagaaatatgtttatgaaagcgatggagcgtggcgaattgtgtgagaaacacgatgtc
gacaacatggctagcctattccacggcatcttctactccatcttcttacaagtgaaccgt
ttaggtgaacaagaagcggtgtataagctggtcgatagctacctcaatatgctgtgtatc
tataagaactag
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