Vibrio paracholerae: SA104470976_02162
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Entry
SA104470976_02162 CDS
T08432
Symbol
ffh
Name
(GenBank) Signal recognition particle subunit Ffh SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl02024
Quorum sensing
vpl03060
Protein export
vpl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SA104470976_02162 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SA104470976_02162 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SA104470976_02162 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpl02044
]
SA104470976_02162 (ffh)
Enzymes [BR:
vpl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SA104470976_02162 (ffh)
Secretion system [BR:
vpl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SA104470976_02162 (ffh)
Eukaryotic Sec-SRP protein
SA104470976_02162 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_30
cobW
KTI12
T2SSE
AAA_31
AAA_24
AAA_33
Mg_chelatase
AAA_19
GlnD_UR_UTase
APS_kinase
Helicase_RecD
AAA_16
YqeC
KAP_NTPase
ABC_tran
AAA_14
AAA_18
ATP_bind_1
Rad17
DUF3867
Thymidylate_kin
TsaE
cas_Cpf1_2nd
Motif
Other DBs
NCBI-ProteinID:
SYZ82250
LinkDB
All DBs
Position
1:complement(2357860..2359245)
Genome browser
AA seq
461 aa
AA seq
DB search
MFENLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVNRVKEGAV
GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSSPDQKPIDIAKNAIDHAK
KKFYDVLIVDTAGRLAIDEQMMAEIQDLHKAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL
PADMKDKVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDINRLLKQF
TQMQKMMKKMQQGGMKGMMRNMQGLMGGGGRGGFGGGFFGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaaccgatcgattgtccaaaacgctgaagaatatcagcggcaaaggt
cgtcttactgaagataacattaaagagaccctgcgcgaagtgcgcatggcgctgttagaa
gcggacgttgcgctacctgtcgtccgtgatttcgtcaaccgcgttaaagaaggcgcagtc
ggggtcgaagtttcaaaatctctgactccgggtcaagagttcatcaaaatcgtccgccag
caacttgaagcggtgatgggcgaatccaacgaagctttgaatcttgctgctcagccacct
gcggttattttgatggccggtttgcaaggtgcaggtaaaaccacctcagtgggtaagctt
tctaagcttttaaaagagcgtgataagaagaaagtgttggtggtttccgctgacgtgtat
cgcccagcggcgatcaaacagctcgaaaccctagccaacgatttaggtgtcgatttcttc
ccatcatcaccggatcaaaaaccgattgatattgctaagaacgctatcgatcacgccaag
aagaaattctacgacgtattgattgtcgataccgctggtcgtttagcgattgacgaacag
atgatggcagagattcaagacctgcataaagcgatcaatccggttgaaacgctgttcgtg
gtcgatgccatgacgggtcaagatgcagccaataccgcgaaagcctttggtgatgcactg
ccactgaccggggtgatcctgaccaaggtcgatggtgatgcgcgtggtggtgcggcgttg
tcggtacgccatattaccggtaaaccgatcaaatttatcggtgtcggcgagaaaaccgat
gccttagagcctttccatccggatcgtattgcttcacgcattcttggtatgggcgatgta
ctgtcactgattgaagatctgcagcgcaatgttgaccaagagaaagccgaaaaactcgcg
aaaaaattcaaagagaagaaaggctttgatttagaagattttcgtgagcaacttggccag
atgaaaaacatgggcggcatgatggggatgctcgataaactgcccggaatgtctcaactg
cctgcggatatgaaagataaagtggatgatcgcgttttcaaacagatggaagccatcatc
aactcaatgaccatgaaagagcgtcaaaaccccgacctcatcaaaggctcacgcaaaaag
cggattgctgcaggttcaggtacccaagtgcaagacataaaccgcctgctcaagcaattt
acccagatgcagaagatgatgaagaaaatgcaacaaggtggcatgaaagggatgatgcgt
aacatgcaaggcctgatgggcggcggtggccgtggtggtttcggcggcggtttcttcggg
cgttaa
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