Vibrio paracholerae: SA104470976_02221
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Entry
SA104470976_02221 CDS
T08432
Symbol
mscS
Name
(GenBank) small conductance mechanosensitive channel
KO
K03442
small conductance mechanosensitive channel
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_02221 (mscS)
Transporters [BR:
vpl02000
]
Other transporters
Pores ion channels [TC:
1
]
SA104470976_02221 (mscS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st_1
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
SYZ82300
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Position
1:complement(2415197..2416063)
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AA seq
288 aa
AA seq
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MVDDLIGGVDVPIVESFNEMNTWLITNSDLLIQYGVNVISAILILFVGNIVVKAVAGSVA
KVLRSKEMDKAVVEFIHGLVRYTLFIIVLIAALSRIGVQTASVVAVLGAAGLAVGLALQG
SLSNFAAGVLIVAFRPFKAGDYVEIAGVAGSVDSILIFQTVLKTPDNKMVVVPNSAVIGG
AITNYSRHATRRVDMVIGVSYKSDLQKTKRVLRETLEKDPRILKDPDITIGVLTLADSSI
NFVVRPWCKTEDYWKVYYDSMQAIKEALDANGIEIPFPQMDVHLNKIN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgatttgataggtggggtagatgttcctatcgtggaaagttttaatgaaatg
aacacttggctaatcactaactcggatctgttaattcagtacggtgtgaatgtgatttcc
gctattttgatcttatttgtgggcaatattgtcgttaaggctgtcgctggtagtgtggca
aaagtcttacgtagcaaagagatggataaggcggttgtggagtttatccacggtcttgtt
cgttatacgttgtttatcattgtactgattgctgcattaagtcgtattggtgtgcaaact
gcatcagttgttgctgtgcttggtgcggcaggtttagcagttggtcttgctttacaaggc
tctctatctaatttcgcagccggtgtcttgatcgtcgcttttcgaccattcaaagccgga
gattatgttgagattgctggggttgcgggctccgttgattctattttaatttttcaaacg
gtattaaaaacaccggataataaaatggttgtggtgccaaactcagcggtcattggcggt
gcgatcaccaactattcacgccatgcaacgcgtcgtgttgatatggtgattggggtttct
tacaagtcagatctacaaaagaccaagcgtgttttgcgtgagacgctcgaaaaagatcct
cgcattctaaaagatccagatattacgattggggtgctgactcttgctgattcttcaatc
aatttcgtcgtgcgtccatggtgtaaaactgaagattattggaaggtttactacgattcg
atgcaagcaatcaaagaagcgctggatgccaacggcatcgaaattccattcccacaaatg
gatgtgcatctgaacaaaatcaattaa
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