KEGG   Vibrio paracholerae: SA104470976_02320
Entry
SA104470976_02320 CDS       T08432                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
vpl  Vibrio paracholerae
Pathway
vpl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SA104470976_02320 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpl03400]
    SA104470976_02320 (uvrA)
DNA repair and recombination proteins [BR:vpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SA104470976_02320 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SA104470976_02320 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_21 DnaJ_CXXCXGXG AAA_25 RsgA_GTPase AAA_23 NACHT nSTAND3 Viral_helicase1 ScfRs
Other DBs
NCBI-ProteinID: SYZ82390
LinkDB
Position
1:2511785..2514607
AA seq 940 aa
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PEHQVPLKAQTISQMVDKVLELPEGSKMMLLATIVKERKGEHVKTLENLAAQGFIRARID
GETCDLTDPPKLELHKKHTIEVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGD
GEEQIFSANFACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLS
LAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGSGRTEIEFKYI
NDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYISNKPCSSCDGTRLKIEARNV
FINDTALPTIVELSIADALTFFQELKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTV
LVVEHDEDAIRMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP
EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLINDTFFKIAHTA
LNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYPPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK
GKTIDEVLEMTVEDAREFFDPVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI
IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggacaaaatcgaagtacgcggcgctcgtacccataacctcaaaaatatcaatctgacc
attcctcgtgacaaattgatagtcatcaccggcctctctggctcaggtaaatcctcactg
gcttttgatacgctgtacgcggaaggtcaacggcgttatgtcgaatcactctcggcttat
gcgcgccaattcctttctctgatggaaaagccggatgtagaccacattgaggggctttca
cccgcgatttcgattgagcaaaagtccacttcccataacccacgctctaccgtgggtacg
attacggaagtgtatgactatttacgtctactctacgctcgggtgggggagccacgctgc
cccgaacaccaagtgccactgaaagcgcaaaccatcagtcagatggtagacaaagtactg
gaattgccagaaggcagcaaaatgatgctgctggcaaccatagtcaaagagcgtaaaggc
gaacacgttaaaacattggaaaaccttgctgcgcagggctttattcgtgcgcgtatcgat
ggtgaaacctgcgatctgaccgatccaccgaaactcgaactgcacaaaaagcacaccatt
gaagtaattgtcgaccgtttcaaagtgcgtagtgatctgcagcaacgcttagccgaatcc
tttgaaaccgccttagaactttccggtggtatcgtcgttgtcgccccgatggaaggtgat
ggcgaagagcagattttctcggctaactttgcttgtccacattgcggttacagcatgcgc
gagcttgaaccacgcctgttctccttcaacaacccagccggtgcttgtccaacctgtgat
ggtttaggagtacagcagtatttcgatccagatcgagtgattcaagatgccaatttaagt
ttggcacaaggtgcgatccgcggttgggatcaaaagaacttttattatttccagatgctg
actgcactggccgagcactacgattttgatgtacacacccccttcaataagctgagcaaa
aagattcaggaaatcattctgcacggctctggtcgcaccgaaattgaatttaagtacatc
aatgatcggggtgatattcgccttaaaaaacatccttttgaaggaattttgcataatttg
gagcgccgctatcgcgataccgaatccaactcggtgcgtgaggagctggcaaaatacatc
tccaacaagccttgcagcagttgtgatggtacgcgcttaaaaatcgaagcacgcaatgtg
tttattaatgatactgcgttgccaacgattgtagaactgagcattgctgatgcgctaacg
ttcttccaagagctcaaactggaaggccaacgtgcacaaatcgctgaaaaagtgatgaaa
gagattaatgaccggctgcaatttttggtcaatgtcgggctcaattacttaaatctctcg
cgcagcgccgagacgctttccggtggcgaagctcagcgtattcgcctagccagtcagatt
ggtgccggtttagtcggtgtaatgtatgtccttgatgaaccctcgattggcctccaccaa
cgggacaacgaacgcttgctgcaaaccctcacccacttacgcaatctagggaataccgtg
ttagtggttgagcatgatgaagatgcgattcgcatggcagatcatgtgattgatattggc
ccaggtgctggcgtacacggcggcatggtggttgccgaaggcaatgtggaggaaatcatc
gccaatccaaactcactcacaggtcaatatctcagtggcgtgaaaaaaatcgcggtacca
gagcagcgcacaccaaaagatgcgaagaaaacggtagagcttaaaggcgcagtcggtaat
aacttaaaaaatgttgacctgtctattcctgttggcctgtttacttgtgtgacgggcgtt
tcaggttcgggaaaatccactctgatcaacgataccttctttaagattgcccataccgca
ctcaatggcgcgacgacggcgacacctgcaccttatcgctccattcaaggtctagaacac
tttgataaagtgatcgatatcgatcagagcccaattggtcgcactcctcgctccaacccc
gccacttacaccggaatcttcactccaattcgtgaattgtttgccggaacacaagagtct
cgctcgcgtggttatccgccgggacgctttagtttcaacgtgcgtggtgggcgctgtgaa
gcgtgtcaaggcgatggcgtgatcaaggtagaaatgcatttcttgcctgatgtgtatgta
ccttgtgatgtgtgtaaaggtaaacgctataaccgagaaacactggaagtacgctacaaa
ggcaaaaccattgatgaagtattggaaatgactgttgaagacgcacgcgagttttttgac
ccagtacctgtgatagcacgtaagttgcaaaccttgatggatgttgggttgtcctacatt
cgtcttgggcaatcagccaccaccttatcaggaggtgaagcgcagcgggtaaaattagcg
cgtgaactctccaaacgagatacgggcaaaaccctgtatattttggatgaaccaaccacg
gggctacacttccacgatattcagcaactactgagcgttcttcaccgcttgcgtgaccat
ggcaataccgtggtggtgattgagcataacttggatgtgatcaaaacggctgactggatc
atcgatttgggcccggaaggcggccaaggcggcggacttattattgcagaaggaacacca
gaagatgtggcgcagatcgaagcttcacataccgcacgtttcctcaagcctttgttgaat
tag

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