Vibrio paracholerae: SA104470976_02383
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Entry
SA104470976_02383 CDS
T08432
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vpl
Vibrio paracholerae
Pathway
vpl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SA104470976_02383 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpl03019
]
SA104470976_02383 (orn)
03009 Ribosome biogenesis [BR:
vpl03009
]
SA104470976_02383 (orn)
Messenger RNA biogenesis [BR:
vpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SA104470976_02383 (orn)
Ribosome biogenesis [BR:
vpl03009
]
Eukaryotic type
Pre-60S particles
RNases
SA104470976_02383 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
SYZ82439
LinkDB
All DBs
Position
1:complement(2569789..2570334)
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AA seq
181 aa
AA seq
DB search
MSFSDQNLIWIDLEMTGLDPETHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDE
WCTTTHTASGLVARVRQSQVSEDEAIEQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHM
PRLEAYFHYRYIDVSTIKELTRRWQPEVLKAFSKTGSHLALDDIRESIAELQFYRKSVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcagcgaccagaatctgatttggattgatttagagatgacgggacttgatcct
gaaacgcacaaaatcattgagatggcgaccattgttaccgacagtgagttaaacatttta
gctgaaggcccagtgattgcgattcatcaacccgaatccgaactcgcgaaaatggatgaa
tggtgtaccacaacgcacacagcgagtggcttggtggcgcgagtacgtcaaagccaagta
agcgaagacgaagcgattgaacaaacgctcgcgtttttaaaacaatgggtaccagaaggg
aaatcgccgatttgtggtaacagtattggccaggaccgacgtttcctttacaaacatatg
ccgcgtttggaagcttacttccattatcgttatatcgatgtcagcaccatcaaagaactg
actcgccgctggcaacctgaagtgctgaaagcgttcagtaaaaccggtagtcaccttgct
ctggatgatattcgtgagtcgatcgccgaactccagttttatcgtaaatcggtattcaag
atctaa
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