KEGG   Vibrio paracholerae: SA104470976_02447
Entry
SA104470976_02447 CDS       T08432                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vpl  Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vpl02048]
    SA104470976_02447 (hsdR)
Enzymes [BR:vpl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SA104470976_02447 (hsdR)
Prokaryotic defense system [BR:vpl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SA104470976_02447 (hsdR)
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 EcoR124_C ResIII HSDR_N DEAD SNF2-rel_dom HAD_2
Other DBs
NCBI-ProteinID: SYZ82492
LinkDB
Position
1:2639387..2642278
AA seq 963 aa
MAYQSEQQLEDNLLAQLSAQGFEVVQLKDNAALEANLKTQLERVNHCSLSTAEFRQVLAK
LEKGNIFRKAKRLRDRLDITLDNGNSQHLSLLFDKPEHNHFQVARQITVKGIYTNRYDVT
LLINGLPLVQIELKRRGIELKEAFNQVKRYQKHSYSANHRLFNYVQLFVISNGVNSQYFA
NNSELSSKQTFYWTDVDNQRLSQLHQFTEAFLTPAHLTLMLSKYMVLNETQKCLMVLRPY
QFYAVEAIIHQVTNSRDNGYIWHTTGSGKTLTSFKAAQLMTSLSEIDKVLFVVDRKDLDD
QTAKEFNAFSKGCVDTTDRTRILFHQLLDKPIRGHTVNENRNAKLIVTTLQKLNNVVTKP
RYLKEMAALQNKRVVFIFDECHRSQFGDTHQNILHFFKQAQLFGFTGTPIFQDNAVAKKS
IKKTTQTLFGKRLHTYVIVDAIRDHNVLKFAIEYVGRYQYKDGSNNNLDIEVEDIDTQEL
LASPERLEKITDYIIAHHKRKTHSGEFNAMFCVSGIPELIQYYELFARKKAEGKHRLKIA
TIFSFDANEEQDYSLGILDGESGIQEIAAKYVNQGDAVKLHSRDKLESFIADYNKLFATS
YTSKDSDSFYDYYKNISKRVKDKEIDLLLVVNMFLTGFDAKCLNTLYVDKNLKQHGLIQA
FSRTNRLHTETKSHGNVVCFRNLKKAADEAFTLFSNKQPTESIEMPSFESLLEDFERACA
ALKAITPTVDSVDSLPDEAAQKLFVLQFRKLLQLKNMLSHYVDFELETTSMEEQEFQDFT
SKYADLNRQIRESNRKEKVSILEDVDFELELLHRDEVNVAYILQLLRDLHGEESHTEQER
KRQIIANLIGSDPTLLSKKELIEKFMNEHLEGIPAYADVDEEFEYFWEREKREALEKLAQ
EEKLNPDKLQILVNRYEMSEEMPLREDIVETLQTKPTLLQRKQIVGRLADRFKAFIDTFV
GGF
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggcttatcaatccgaacaacaactagaagataacctgctcgcccaactcagtgcgcag
ggctttgaagtggtgcagttaaaagacaatgccgcgctggaagcgaatttaaaaacgcaa
cttgaacgggtcaatcactgctcgttatcgacagcggaatttcgtcaagtcctcgccaag
ctagagaaaggcaatatctttcgcaaagccaaaaggctgcgtgatcgtctcgatatcact
ctagacaatggtaactcgcagcatctctctctgttgttcgataagccagaacacaaccac
tttcaagttgctcggcaaatcaccgtcaaaggcatttacaccaatcgctatgatgtgacg
ctgctgattaacggcttgccgctggtgcagattgagctaaaacgccgtggcattgagctg
aaggaggcgtttaaccaagtgaagcgctatcagaaacactcttatagcgcgaatcatcgg
ctgtttaactatgtgcagctgtttgtgatctccaatggggtgaatagccagtattttgcc
aataacagcgagctttcctccaagcaaactttttattggacggatgtcgataaccagcgt
ttaagccagttgcatcaatttaccgaagcgtttctcacaccagcgcatctcactctgatg
ctcagcaaatacatggtgctcaacgaaacacagaaatgtttgatggtgttgcgcccttat
cagttctatgcagtagaagcgatcattcatcaagtcaccaattcgcgtgataatgggtat
atctggcacactacaggctcaggcaaaacactcacctcattcaaagccgcgcaactgatg
acctcgctcagcgagatcgataaagtgctgttcgtggtggacagaaaagatctcgatgat
cagacggccaaagagtttaatgcgttctccaaagggtgtgttgatactacagatcgcacg
cgcattctgtttcaccaactgctggataagccgatcagagggcacacggtcaacgaaaat
cgcaatgccaagctgattgtgaccaccttgcaaaagctcaacaatgttgtcactaagccg
cgctatctcaaggaaatggccgcattacaaaataagcgcgttgtgtttatttttgatgag
tgccaccgcagccagtttggagatacgcaccaaaatatcctccattttttcaagcaagcg
cagttgttcggcttcactggtacaccaatttttcaagacaatgccgtcgcgaaaaagtct
atcaagaaaaccactcaaaccctgtttggcaagcggctgcatacctatgtgattgttgat
gcgattcgtgaccacaatgtgctgaaatttgccatcgagtatgtcgggcgttatcagtat
aaagatggctcaaacaacaatttggatattgaagtggaggacatcgatacccaagaactg
ctggcctcaccggaacgcttggaaaaaatcaccgactacatcattgctcaccataagcgt
aaaacccacagtggcgagtttaacgcgatgttttgtgtctcaggcattcccgagctgatt
caatattatgagctttttgcacgcaagaaggccgaaggcaaacaccgcctaaaaatcgcc
acgatttttagttttgatgctaatgaggaacaagattactcactgggaatactggatggt
gaatcaggcattcaagaaatcgctgccaagtacgttaatcaaggtgatgcggtgaaactg
cacagccgagataagttggagagctttatcgccgattacaacaaactgtttgccactagc
tacaccagcaaagacagtgactctttctacgattactacaaaaacatctccaaacgggta
aaagataaagagatcgatcttctgctggtggttaatatgtttttgacgggctttgatgcc
aaatgtttgaataccctctacgttgacaaaaatcttaagcagcatggtttgattcaagca
ttctcacgcaccaaccgtctgcacacggaaaccaagtcacacggcaacgtagtttgcttc
cgtaatttgaaaaaagccgctgatgaagcttttaccctattctccaacaaacaaccgact
gaaagcattgaaatgccttcgtttgagtcgttacttgaagattttgaacgtgcttgcgca
gcactgaaggctatcaccccaacggttgattcggttgattccctaccagatgaagcggcg
caaaagttatttgttttgcagttccgcaagttactgcaactgaaaaatatgctcagccat
tatgtggacttcgaactggagaccaccagcatggaagaacaagagtttcaagatttcacc
agtaaatacgcagaccttaaccgccagatccgagagtctaatcgcaaagagaaagtctct
atcttagaagatgtcgatttcgagctagagttgctacaccgtgatgaagtgaatgtcgct
tatatcctacagctattgcgtgacctacatggcgaagagagccatacagaacaagaacgc
aagcgccaaataattgcgaatttgatcggttctgacccgacattgctcagcaaaaaagaa
ctgattgagaagtttatgaacgagcacttggaaggtattcccgcctacgctgatgtggac
gaagagtttgagtacttctgggagcgtgaaaaacgcgaagcactggaaaagctggctcaa
gaagaaaaactcaaccccgacaagttgcaaattctggtcaaccgttacgagatgagcgaa
gaaatgccactgcgtgaagatattgtcgagacgctacaaaccaagcccacactgctgcaa
cgcaaacagattgttggccgcttagctgaccgctttaaagcattcatcgatacctttgtg
ggtgggttttag

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