Vibrio paracholerae: SA104470976_02523
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Entry
SA104470976_02523 CDS
T08432
Symbol
mutM
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SA104470976_02523 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpl03400
]
SA104470976_02523 (mutM)
Enzymes [BR:
vpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SA104470976_02523 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SA104470976_02523 (mutM)
DNA repair and recombination proteins [BR:
vpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SA104470976_02523 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
COOH-NH2_lig
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
SYZ82568
LinkDB
All DBs
Position
1:complement(2727582..2728391)
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AA seq
269 aa
AA seq
DB search
MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI
IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAPD
ESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFTSR
LHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGKA
KQPCPHCGEPICEQKIAQRNTFFCPQCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattacctgaagttgaagtcagccgattagggatctccccacatttggtcggc
ggcaccattcaatccttagtgttacgtacgcccaagttgcgctggccgatccctcaagag
ctgaaacagcttgaagggcagactattctcgcgattcatcgtcgagccaagtatctgatt
attgaaaccgccgtcggcagcgcgattgtgcatttaggtatgtctggctcgctgcgtatt
ttggatggcgattttcctgccgcgaaacacgatcatgtggatctggtgatgaccagtggc
aaacggctgcgctataacgatccgcgccgcttcggggcttggttatggtgcgcgcctgat
gagagccacgaagtgctcgggcgtttaggaccggagcctctgaccgaagcttttaacgct
gaatatatgatggacaaagcgcgcaacaaacgcattgcagtcaaagctttcatcatggac
aacgcagcggtcgtgggtgtgggcaatatctacgccaatgaatcgctgtttacatcacgc
ctccatccactacgccccgctcattcgctgagcttagaggagtggcaaaccttagtggcg
aacatcaaacaagtgctgcaagtggcgattaagcaaggcggcaccacgctgaaagatttt
acccaaagcgatggtaagccgggctatttcgcacaagagctgcaagtgtatggcaaagcc
aaacagccttgcccccattgtggagagccgatttgcgagcagaaaattgctcagcgcaat
acctttttctgcccgcagtgccagcattga
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