Vibrio paracholerae: SA104470976_02585
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Entry
SA104470976_02585 CDS
T08432
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpl03016
]
SA104470976_02585 (trmA)
Enzymes [BR:
vpl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SA104470976_02585 (trmA)
Transfer RNA biogenesis [BR:
vpl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SA104470976_02585 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_12
Methyltransf_15
DREV
PrmA
Motif
Other DBs
NCBI-ProteinID:
SYZ82618
LinkDB
All DBs
Position
1:2794385..2795494
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AA seq
369 aa
AA seq
DB search
MATLDVNPELYQAQLADKIARLKAMFADYSMPELEVFESPVANYRMRAEFRIWHEGDDMY
YIMFNQETREKYRVDQFPAASRLINDLMPLLMDAMKGSPILRHKLFQVDFLSTLSGEILV
SLLYHRQLSEEWTTAAQALKQRLNDEGFNLNLIGRARKMKVVLDRDYVVEKLQVNGQPYV
YKQVENSFTQPNAKVAEKMLEWAVDCTHESKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVEAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFV
DPPRSGMDIDTCKMVQGYERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHME
AGVMLERKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgatgtaaaccctgaactctaccaagctcaattggcagacaaaatcgcc
cgtttaaaagcgatgtttgctgattactccatgcctgagctggaagtgtttgagtcgcca
gtggcgaattatcgtatgcgtgctgaatttcggatttggcatgaaggcgatgacatgtac
tacatcatgtttaatcaagagacgcgcgagaagtaccgcgtagaccaatttccggccgcg
agtcgcctaatcaatgatttgatgccactgttgatggatgcgatgaaaggcagccctatt
ctgcgccataaactgtttcaggttgatttcctctcaaccctcagtggcgagattttggtt
tcactgctgtaccatcgacagctcagcgaagaatggaccactgcagcgcaagcactcaaa
cagcgcctaaacgatgaaggcttcaacttaaacttaatcggtcgtgcgcgtaaaatgaaa
gtagtgctggatcgtgattacgtggtggagaaattacaggtcaacggccaaccttatgtg
tataagcaagtcgaaaacagttttacccaacctaacgcaaaggtcgccgaaaaaatgttg
gagtgggcagttgattgcactcatgagagcaagggggatttgcttgaactgtattgtggt
aacggcaacttctcactcgcgttagcgcaaaactttgagcgcgtactggcaaccgaatta
gccaaaccttctgtagaagctgcgcaatttaatattgccgccaaccagatcggcaacgtg
cagatcattcgcatgtcggcagaagagtttactcaggcgatggaaggcaaacgcgaattc
aatcgcttgaaggatgcgggagtcgatctgcaaagctaccgttgcaacactatttttgtc
gacccaccacgctcaggcatggatatcgacacttgtaagatggtgcaaggttatgagcgc
attctgtacatctcttgtaacccagaaacgctgcaagagaacttacaagtcctaggtgaa
acccatcaagtggtgcgctttgctctcttcgaccaatttccttacacccaccacatggaa
gcgggcgtgatgctagagcgcaaaaagtaa
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