KEGG   Vibrio paracholerae: SA104470976_02611
Entry
SA104470976_02611 CDS       T08432                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vpl  Vibrio paracholerae
Pathway
vpl00300  Lysine biosynthesis
vpl00470  D-Amino acid metabolism
vpl01100  Metabolic pathways
vpl01110  Biosynthesis of secondary metabolites
vpl01120  Microbial metabolism in diverse environments
vpl01230  Biosynthesis of amino acids
Module
vpl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SA104470976_02611 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SA104470976_02611 (dapF)
Enzymes [BR:vpl01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SA104470976_02611 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: SYZ82644
LinkDB
Position
1:complement(2817298..2818128)
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM
GVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVEDIRTAAVETLGPL
LESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQV
RVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQISC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcatttccatttttctaaaatgcacggtttgggcaacgactttatggtcgtggattgt
attacccaaaacgtcttcttctctccggaattgatccgccgtctggcggatcgccatacg
ggagtcggctttgatcaactgttggtggttgaagcgccttacgatccagaatcggatttc
cattaccgcattttcaatgccgatggtagcgaagtggagcagtgtggcaatggtgcgcgc
tgttttgcccgttttgttcgcatgaaagggttaaccaacaagtacaccatccatgtcagt
accaagaaaggcaaaatggtactcaatgtggaagaggaagatctgatcaccgtgaacatg
ggtgtgccggagtttgagccgaacaagatcccatttcgcgccaaacagagcgaaaaaacc
tatattctgcgtgtcggtgaacacaccttgttttgtggtgcggtgagtatgggcaatccg
catgtagtgactgtggtggaagatattcgcactgctgcggtagaaaccttagggccactt
ttggaatcgcacgagcgtttccctgagcgcgtcaacgccggttttatgcaggtcgtgagc
cgtgatgagatcaatttgcgcgtatatgaacgtggtgctggcgaaactcaagcttgtggc
agtggcgcgtgcgccgcggttgcggtaggcattttgcaaggtttactggatgagcaagtt
cgtgtccatcttcccggtggcgaactggaaatccactggcaaggccccggaaaaccgctg
tatatgacgggcccggctactcacatctacgatggccaaatctcttgctaa

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