KEGG   Vibrio paracholerae: SA104470976_02612
Entry
SA104470976_02612 CDS       T08432                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vpl  Vibrio paracholerae
Pathway
vpl00300  Lysine biosynthesis
vpl00470  D-Amino acid metabolism
vpl01100  Metabolic pathways
vpl01110  Biosynthesis of secondary metabolites
vpl01120  Microbial metabolism in diverse environments
vpl01230  Biosynthesis of amino acids
Module
vpl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SA104470976_02612 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SA104470976_02612 (lysA)
Enzymes [BR:vpl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SA104470976_02612 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: SYZ82645
LinkDB
Position
1:complement(2818140..2819393)
AA seq 417 aa
MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV
KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI
KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA
QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG
LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK
NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE
GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaattatcaggaagatggtcagttgtgggctgagcaagttccactcgcc
gatttggcaaaccagtacggtacaccgctttatgtatactcaagagcgacacttgagcgc
cattggcacgcgtttgataaatcagtcggtgattatcctcacctaatttgttatgcggtg
aaagccaactctaacttaggggtattgaatactttagctcgtttgggttcaggttttgat
atcgtctccgttggtgaattagagcgagtactggctgccggtggtgacccaagcaaggtg
gtattctctggtgtgggtaaaaccgaagctgagatgaagcgcgctctgcaattgaagatc
aaatgctttaacgtggaatcggagcctgagctgcagcgcctgaataaagtggccggcgag
cttggtgttaaagcgccgatttcactgcgcatcaatcctgatgtggatgccaaaactcac
ccttacatttcaacgggcctgcgtgataacaaatttggtatcacctttgaccgcgcagcg
caggtgtatcgcttagcgcacagcttacccaacctcgatgtacatggcattgactgccat
attggctcacagctaactgctctcgcaccgtttattgatgcgactgaccgtttactggca
ctgattgactcgctgaaagcggaaggtattcatatccgccacttggatgtcggcggtggt
ttaggggtggtttatcgtgatgaactgcctccacagccttcggaatatgccaaagcattg
ctggaccgcctagagcgccaccgcgatttagagctgatttttgaaccgggacgcgcgatt
gcggctaacgcgggagtattggtgactaaggtggagtttctcaaacacaccgagcacaaa
aactttgcgatcattgatgcggcgatgaacgatctgattcgtccggcgctataccaagcg
tggcaagacatcattccactgcgtccgcgccaaggcgaagcgcaaacctatgatttggtt
ggcccagtgtgtgaaaccagtgatttcctagggaaagatcgcgacttagtgttgcaagag
ggggatttactggcggtgcgctcttctggtgcatatgggtttaccatgtcgtcgaattac
aatacccgtccgcgagtggctgaagtcatggttgatggcaataaaacctatttggtgcgc
cagcgtgaagagcttagcagcttgtgggcgttagaatcggtattaccggagtaa

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