Vibrio paracholerae: SA104470976_02888
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Entry
SA104470976_02888 CDS
T08432
Symbol
apxIB_2
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vpl
Vibrio paracholerae
Pathway
vpl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SA104470976_02888 (apxIB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpl02000
]
SA104470976_02888 (apxIB_2)
02044 Secretion system [BR:
vpl02044
]
SA104470976_02888 (apxIB_2)
Transporters [BR:
vpl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SA104470976_02888 (apxIB_2)
Secretion system [BR:
vpl02044
]
Type I secretion system
Adhesin protein transporter
SA104470976_02888 (apxIB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
PhoR
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
SYZ82908
LinkDB
All DBs
Position
2:complement(199523..201637)
Genome browser
AA seq
704 aa
AA seq
DB search
MQDTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLD
QIPHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFM
VKKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYD
KVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRM
EARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGV
LILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVA
HMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAI
GPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPN
SPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHI
DIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQV
GEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLIL
ITHKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNVRAVQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatacgttactcaattcgctggtgtacgtaagccgttattatggtttagcgaat
tctcctgaagcactgatcaacggcttaccgttggctgacggcaagctcacgccttttctg
tttcctcgctcggcggaaagagctgggctgatcgcgaaagaaaaccgcgcgccgttagac
caaattcctcatctggtgtttcctgtggtattgctgctcaaaggcggtgaggcctgcgta
ctcaatagcatcaatcaggaaacgcaagaggctgaaattgttaccgcagagtcggggtta
gtccccgtcgcttactcgctcagtgatttagaagcgatgtatattggccgttactttatg
gtcaaaaagcagtttcgctttgatgaacgctcaccagaagtcctgaaacccagagatggg
cactggttttggagcaccatctataaatccaagcatatttatcgcgatgtgttgatcgcg
tcactgctgattaacttgtttgccgttgcagcgccgatgttttcacggattgtgtacgac
aaagtcgtccccaatttggcttttgaaaccttgtgggtgctctctagcggcatcttagtg
atctttttgttcgatttcgtatttaaaatgctgcgcagctacttcattgatgtcgcagga
aaaaaatcggacattctgatctcttccaaactgtttagtaaagtgatgggcatccgcatg
gaggctcgcccaccttcggttggtgcttttgctcgccatttgcaagagtttgaatcaatt
cgtgaattttttacatccgcgacgatttcttcactgattgatctgccattcgccctgctc
tttttagtgttgatctggttaatggctggacatttagtgtgggtgcctgtgatcggtgtc
ctgatcttggtgatttactcatttctcattcaaagccgcttaaaacgggcaattgaagaa
ggctcaagactcgcctcacaaaagtacgccaacctcatcgaaagcttagcaggactagaa
acggtgaagctgtttggcgcgcaaggacaattccagtaccgctgggaagaagccgttgca
cacatggcgaattggaacattaaaagtcgccgtatcactgatagtattcaaaacaccgcc
ggttttgtgcagcaagcagccaatatcggcatgatcattgtcggggtctacctgatttcc
aacggtgacctgaccatgggtggactgattgccgcaacgatgctcagtggccgtgcgatt
ggccccttagtgcagctctcactgctttcaacccgttacaaccaagccaaatcttctatg
accatcattgaacaagtgatgtcgatgcctgatgaacaggaggaaggcaaacgctatatc
catcgtcccatcattcaaggcaagattgagctggaccgcgtcactttccattatccaaat
tcacctatcgcctccgtccgtgatttaagtcttaccatccatccgggtgaaaaagtggcg
attattggtcgaattggttcgggtaaaaccacgcttgagcgcttgattatgggtctgtac
aagccaactgaagggcatgtgcgaattgatgatacggatatctcacagctgcatcacatt
gatattcgccgcaatattggctgtgtaccgcaagacagtgtgctgttttatggctcgatc
cgcgacaacattacccttggccgcccactctccgatgatcgtgaggtaatggatgcggcc
aaccgagcgggggttacggtctttactcaacaagatcctgcgggtctagaacgtcaagtg
ggggaagggggtatgctgctctcgggtggtcaacgtcaatcggtgtcaattgcgcgcgct
ttccttggccgccctcccgtcttactgatggatgaacccaccagcgcgatggataaccgc
tcagaaatgcacattaagcaacaacttagccaactcaagccgagtgaaacgctgatcctt
atcacccataaaacctcgatgctggatgtggttgaccgcgttattgtgatggagaaaggc
tgcattattgccgatggtccaaagcacgaagtgctgaacgatctgcgccaaggtaatgta
cgcgcagtgcaatag
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