Vibrio paracholerae: SA104470976_02911
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Entry
SA104470976_02911 CDS
T08432
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00330
Arginine and proline metabolism
vpl00480
Glutathione metabolism
vpl01100
Metabolic pathways
vpl01110
Biosynthesis of secondary metabolites
vpl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SA104470976_02911 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SA104470976_02911 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SA104470976_02911 (speC)
Enzymes [BR:
vpl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SA104470976_02911 (speC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
SYZ82931
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Position
2:230765..232927
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AA seq
720 aa
AA seq
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MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFNESYLRDAVRNVDPSRADAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGLVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcacaacccaacgt
gaagtggtggatgtactgaaaaccgatttctgtgacatcggtgcggcggtggtttccgtc
gaagacgtacaaaacggcatcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgctgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagttgaaactgccgta
cgtcgttatcaagaaagcctgttgccacctttctttggcacattgaaaaaatacgtagac
atgggtaactcgacctttgcttgtcctggtcatcaaggcggtcagttcttccgtaagcat
ccggttggtcgccagttctttgatttctttggtgaaaccttattccgctcggatatgtgt
aacgcagacgtgcgtttgggcgacttgctgatccatgaaggcgccccacatgatgctcag
gcttacgcggcgaaagtgtacaacgcagataaaacctactttgtactcaacggcacatcg
gcctccaacaaagtggtgtgtaacgcgctgctgacaccgggagatctggtgctgtttgac
cgcaacaaccataaatccaaccaccacggtgcgttaattcaagcgggtgccactccggtt
tacttagaaacggcacgtaacccatttggttttatcggcgggattgatgcgcactgcttt
aacgagtcttacctgcgtgatgcagtacgtaatgtcgacccaagccgcgcggacgcgaaa
cgcccattccgtcttgccatcattcagctcggtacttacgacggcacgatttacaacgcg
cgtcaggtagtagatcgcatcggtcatctgtgtgactacatcctgtttgactcagcgtgg
gtcggctatgaacagttcatcccaatgatgaaagactgctcaccactgctgctcgatcta
aagcctgaagatccgggcatcatcgtcactcagtccgtgcataaacagcaggcgggtttc
tcacaaacttcgcaaatccacaagaaagatcaccatatcaaaggccaagagcgttactgc
aaccataaacgctttaacaacgcctttatgctgcacgcctcaaccagcccattctacccg
ctgtttgcggcgctcgatgtgaacgccaagatgcacgaaggggacagtggccgctaccta
tggcgtgaagcggtgaaaactggtatcgaagcccgtaagcttctgatgaaaaaatgtaaa
tacatcaagccgtttattccaccgatgatcgaaggtaaaccttggcagtctcaccctacc
gagcaaattgccgatgatttgcgtttctttgaatttgagccgggtcagaaatggcatgcg
tttgaaggttacgaacatggtcagtatttcgttgacccttgtaagttcctgctgaccaca
ccggggattgacccagaaaccggcgaatacgagcactttggtattccggccaccatactg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactcgatcctc
ttcctgctcaccccagccgaagatatggcgaagatgcagcatttagtggcgcaaattgcc
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtattgccgaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttgtgtcaggaaatgcac
gatctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttat
ttcccacgtgcggtaatgaacccacaagaagcgaacttggcctttgtacgtggtctggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgccgctgaaggcgcactgccttac
cctccaggcgtgttgtgtgtggttccgggagaaatatggggcggttcagtacagcgttac
ttcctcgctctagaagaaggcattaacttgctgccgggttttgcgcctgagttgcaaggg
gtgtatctggagccgacaggcgagggacgagtacaggccatgggctatgtactgaaacgt
taa
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