Vibrio paracholerae: SA104470976_03285
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Entry
SA104470976_03285 CDS
T08432
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00230
Purine metabolism
vpl00240
Pyrimidine metabolism
vpl01100
Metabolic pathways
vpl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SA104470976_03285 (nrdD)
00240 Pyrimidine metabolism
SA104470976_03285 (nrdD)
Enzymes [BR:
vpl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
SA104470976_03285 (nrdD)
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GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
SYZ83300
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All DBs
Position
2:620971..623091
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AA seq
706 aa
AA seq
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MKPIVIKRDGSKAPFNRDRIQAAVESASDHADQEIAIYALNVALAVELKLRDYDEVHIAE
IQTLVENELMQGPYKALARSYIEYRHDRDVAREKQSKLTKEIEGLIQESNADLLNENANK
DGKVIPTQRDLLAGIVAKHYAKTRILPRDVVQAHESGDIHYHDLDYAPFFPMFNCMLIDL
KGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPYVTASY
EKHLEIAREWDIHSPEAFAKARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQQSILKNRIAGLGKNRKTAVFPKLVFAIKDGLNHKAEDPNYDIKQLALECASKR
MYPDILNYDKVVEVTGSFKTPMGCRSFLNPYEENGELIHEGRNNLGVVSLNLPRIALQAK
GDINKFYALLDDKLKLARRALDTRINRLENVKARVAPILYMEGACGVRLKANDSIADIFK
HGRASISLGYIGVHETIMALFGQQKHVYDDVQLREEAVKIIQHLRNAVEQWKKETGYAFS
LYGTPSENLCSRFCRIDAKQFGVVEGVTDKGYYTNSFHLDVQKKVNPYDKIDFEMPYPEI
SSGGFICYGEFPNMQCNVEALENVWDYSYHRVPYYGTNTPIDECYECGFTGEFDCTSKGF
VCPRCGNHEPTKVSVTRRVCGYLGSPDARPFNVGKQEEVKRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaatcgtaatcaagcgtgatggctcaaaagcgccattcaaccgagatcgtatt
caagccgctgtggaaagtgcttcggaccatgccgatcaggaaatcgctatctacgcactc
aatgtggcgttagccgttgaactcaagctgcgtgattacgatgaggtacacatcgccgag
attcaaaccttagtagagaacgagctaatgcaaggtccgtacaaagcattagctcgttca
tacattgaatatcgccatgaccgcgatgtcgcgcgtgaaaagcagagcaagctgaccaaa
gaaatcgaaggtctgatccaagaaagcaatgcggatctgctcaatgaaaacgccaataaa
gatggcaaagtgatcccgactcagcgcgatttgttggcgggtattgtcgccaagcattat
gccaaaacgagaattttaccacgtgatgtggtgcaagctcatgagtcgggcgatattcat
tatcatgatctggattacgcgcctttcttcccgatgtttaactgcatgttgattgactta
aaaggcatgctgactcatgggtttaaaatgggtaatgctgaaattgacacgcctaagtca
atttcaaccgcaacggcagttaccgcgcaaattattgctcaagtcgcgagccatatttat
ggtggcactaccatcaaccggattgatgaagtactggctccttatgtgacagcaagctac
gaaaagcatttagagattgcccgcgaatgggatattcacagccctgaagcgtttgctaag
gcgcgcactgaaaaagagtgctatgacgctttccaatcgttggagtatgaagtcaacacg
ctgcataccgcgaatgggcaaacaccgtttgtgacttttggttttggtctgggcacaagc
tgggaatcgcgcttgatccagcaatcgatcctgaaaaatcgcatcgcaggtttgggtaaa
aaccgtaaaacggcggtattcccgaaactggtgtttgcgattaaagatggactcaaccac
aaagcagaagatcctaattacgacattaagcagctcgcgttagagtgcgcttctaaacgc
atgtacccagacattctcaactacgacaaagtggttgaagtgacgggttcattcaaaacc
ccgatgggatgtcgctctttcctaaatccttatgaggaaaatggggagttgatccatgaa
gggcgtaataatcttggcgttgtaagcttgaacctgccacgcattgccttgcaggcgaaa
ggcgatataaacaaattctatgctctgttggatgacaaactgaaacttgctcgccgcgca
ttagatactcggattaaccgtttagagaatgtgaaagcacgtgttgcaccaatcctatat
atggaaggggcatgtggtgtgcgtttgaaagcaaatgattcgattgcggatattttcaaa
catggccgtgcttctatttcattaggttatatcggtgtacatgaaaccatcatggcactg
tttggccagcaaaagcatgtttatgatgatgtgcaactgcgcgaagaagccgtgaaaatc
attcaacatctgcgcaacgcggttgagcagtggaaaaaagagaccggttacgcgttcagc
ctgtatggcacgccaagtgaaaacctgtgtagccgattctgccgaattgatgccaagcaa
tttggcgtggtggaaggggtgacggataaaggttactacaccaacagcttccatttggat
gttcagaagaaggtgaatccgtacgacaagatcgattttgaaatgccgtatccggaaatt
tcaagcggtggattcatctgctacggcgaatttccgaacatgcaatgtaacgtagaagcg
ctcgaaaacgtatgggattacagttatcaccgcgtgccgtattacgggaccaatacgcca
atcgatgaatgttatgagtgtggttttacgggcgaatttgactgtaccagtaaagggttt
gtttgcccgcgatgtggcaatcatgagccgaccaaagtctcagtgacgcgtcgagtatgc
ggttatttgggcagcccagatgcacgtccatttaacgtcggtaagcaagaagaagtaaaa
cgtcgggtaaaacacctgtag
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