KEGG   Vibrio paracholerae: SA104470976_03511
Entry
SA104470976_03511 CDS       T08432                                 
Symbol
rhlE_5
Name
(GenBank) ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
vpl  Vibrio paracholerae
Pathway
vpl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SA104470976_03511 (rhlE_5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpl03019]
    SA104470976_03511 (rhlE_5)
Enzymes [BR:vpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SA104470976_03511 (rhlE_5)
Messenger RNA biogenesis [BR:vpl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SA104470976_03511 (rhlE_5)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_22
Other DBs
NCBI-ProteinID: SYZ83522
LinkDB
Position
2:complement(872204..873472)
AA seq 422 aa
MSELSITFSQLGLDSRLLNTLSELGIVNPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAF
GLPLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTS
MKVQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVL
RRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRE
LLSYLIGSKNWQQVLVFTKTRQGSGALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG
KVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQ
PQLEAIERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGRSSEKRKLKAQLKIHAQRGKK
AR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcagaactctccatcactttttcgcaattaggcttggattctcgtctgctgaataca
ttgagtgagcttgggattgtcaatcccactccaatccaacagcaagctattcctcatgta
ttgcaaggaaaagatgtgctggcaggggcgcaaaccggaaccggtaaaacggcggcattt
ggcttacctttgatccaacgctttattgagcagccttggcagcgtgaagcaaacagcaaa
gagatccgagcgttagtgctggtgccaacgcgtgagttagctcagcaagtattggatagc
ctacaagcctacgcgaaaggaacggagcttaagatcgtggccgtttacggcggcacgagt
atgaaggtgcagctcaatcatttgcgtggcggtgtggatattttgattgcgacgccgggg
cgtttgctcgatcacgcccatgtgaaatcgctgtttttgggcaaagttgaagtgttggta
ctcgatgaagcggatcgcatgctggatatgggctttatgccagatttgcagcgcgtgctg
cgccgtttatcgccactgcgtcaaacgctgtttttctctgcaacgtttgatagcaaaatc
aaagcggtcgcgtatcgcatcatgcgtgatcctatcgaagtgcaggtaacgccatccaat
tccacggcagaaaccgtgcagcagatggtgtatccggtggataaaaagcgcaagcgtgaa
ctgctctcttatctgatcggttcgaaaaattggcagcaagtgttggtgtttaccaaaacc
cgtcaaggcagtggtgcactggcggaagaactcaagttggatggtataaaagcggtgtcg
attaatggcgataaaagccaaggtgcacgccaaaaggctttggatgattttaaagcaggc
aaagtgcgagctttgattgcgaccgatgtcgccgcgcgtgggttagacattgcccagctt
gagcaagtggtgaactacgatatgccatttaaagcggaagactatgtgcatcgtattggg
cgtacggggcgcgcaggtctagcgggattggcggtctctttgctgtcgcatgatgaacag
ccacaactcgaagcgattgagcgtttactcaatacacgtctgccgcaagagtggttgaaa
ggttttgagcctagccctgtggtgcatgaggaaaattcaccgcgtcgctcggctggccgt
tcgtcagaaaaacgcaaactaaaagcacaactgaaaatccatgcgcagcgcggtaaaaaa
gcgcgttaa

DBGET integrated database retrieval system