Vermiphilus pyriformis: KG892_00395
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Entry
KG892_00395 CDS
T07973
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vpm
Vermiphilus pyriformis
Pathway
vpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KG892_00395 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpm03400
]
KG892_00395 (ruvB)
Enzymes [BR:
vpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KG892_00395 (ruvB)
DNA repair and recombination proteins [BR:
vpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KG892_00395 (ruvB)
RecFOR pathway proteins
KG892_00395 (ruvB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_14
DUF815
NB-ARC
MCM
nSTAND3
IstB_IS21
Sigma54_activat
AAA_19
AAA_16
RNA_helicase
PaRep2b
Rad17
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UNE35478
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All DBs
Position
complement(77607..78638)
Genome browser
AA seq
343 aa
AA seq
DB search
MTSFTNNSPFEIFNAQDTTHEKAHDFTPTTFEEYLGQTELKNKLRVYTQAALQRNEPLDH
LLLFGPPGLGKTTLSCIMAHIMKVNIKICSGPMMERTGDLVAILSSLTPRDILFIDEIHR
MPTHVEEVLYSAMEQFRVDVILGQGAGAKSINLPLAPFTLIGATTKSGMISAPLRSRFGI
VERLDFYTYQELTEIVLQSAQFLQLPITPQGAYMIARASRGTPRIAKKMVRRVRDIAQVD
HNNMATDEVVAKALEFLGIDSDGLSVLDNYILKTILISCKGGPVGLETLASLVAEDKETL
ESVYEPYLIRQGYLEKSARGRMISQARYVQLLKKYTASGNIDS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttttaccaataactcaccttttgaaattttcaatgcacaagacactactcat
gaaaaagctcatgactttacacccacaacttttgaagaatatttgggtcaaacggagctt
aaaaacaagttacgagtatatacacaagcagctcttcagcgtaatgaaccactagatcat
ctattattattcggaccaccaggtttaggtaaaactacgttgtcatgtattatggctcac
attatgaaggtaaacataaaaatttgctcgggtcctatgatggaacgtactggcgatcta
gttgcaatactgtcaagccttacaccgcgcgatatactattcattgatgaaattcatcgc
atgccaacgcatgtagaagaagtactatatagcgctatggaacagtttcgggttgacgtt
attttaggtcaaggagcgggtgcaaaatcaataaacttacctcttgcaccgtttactctt
attggagctaccactaaaagtggtatgatttccgcaccactcagaagcagatttgggata
gtcgagcggcttgatttctatacctaccaagagttaactgaaatagttctgcaaagcgct
caattcttacaactaccaattactccccaaggagcgtatatgattgctcgtgcgtcacgc
ggaactcctcgaattgctaaaaaaatggtgcgcagagtacgggatatagcgcaagtagac
cataataatatggctaccgacgaagtagtggccaaagcattagaatttttaggaatagat
tctgatggcctgagcgtacttgataactatatcctcaagactattttaatctcgtgtaaa
ggtgggccagtgggcttggaaactctcgcttcgttagtagctgaagataaagaaaccctc
gagtcagtatatgaaccgtatttaattcgacaaggttatttagaaaaaagcgctcgcgga
agaatgatttcccaagcacggtatgttcaattgctaaaaaagtatactgcatctggcaat
atcgacagctga
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