Vermiphilus pyriformis: KG892_03155
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Entry
KG892_03155 CDS
T07973
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vpm
Vermiphilus pyriformis
Brite
KEGG Orthology (KO) [BR:
vpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpm03019
]
KG892_03155
03009 Ribosome biogenesis [BR:
vpm03009
]
KG892_03155
Messenger RNA biogenesis [BR:
vpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KG892_03155
Ribosome biogenesis [BR:
vpm03009
]
Prokaryotic type
rRNA processing factors
KG892_03155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
GSKIP_dom
KH_DTX3L
Motif
Other DBs
NCBI-ProteinID:
UNE35945
LinkDB
All DBs
Position
complement(638023..639495)
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AA seq
490 aa
AA seq
DB search
MAITKDEELQNIYFSSTGDQPLERLYIKGVITKILPGIQTAFVDIGQEKAGFLHISEIDR
ELAIARMSSSDDEDGEDTELEQASKPVRQELDISSILKEGEPILVQVSKEPVYQKGAKLT
TCFTLPGRFIVLMPNIPRIGISKKIEAKEERQRLKDLVHSQLPDGMGAIIRTTCEGRSAQ
EIGKDISFLVNIWSEISKKFANSDTKTVLHQDIDLPLQIVRDHLDNDVEAIISDSKESYD
TIYKFVKQIAPEYTHKVKMYEGSTPLFTFYNIEDQIEQALERKVPLKSGGTLIIESTEAM
TVIDVNTGKFTGKKSLEDTILKTNLEAAHQIVRQLRLRNIGGIIVIDFIDMSSSGNRQKL
FKFFEKTLREQDKFQSVVLKVSEFGLVQMTRKRSGKTLVQELTVPCTTCHGYGFVPSLRT
QAYIILRKINEHFHLNAPKAHSTIHLNPAVFEYVTHIEYNSILNLEKKYNTKITLSSSTN
CPMASFTMSA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
attgcaatcaccaaagatgaagagcttcaaaatatctatttttcttcaactggcgaccag
ccactggaacgtctttacatcaaaggtgttattaccaagatactgcctggcattcaaaca
gcctttgtagacataggacaagaaaaagctggatttttgcatatctctgaaattgatcgt
gagcttgcaatcgcacgtatgtcctcttctgatgatgaagatggagaagatacagaatta
gagcaagcatccaagcctgtacgccaggaattggacattagtagcatcctcaaagagggt
gagcctattcttgtacaggtaagcaaagagccggtatatcaaaaaggagcaaagcttacc
acatgctttacgttacctggccgctttattgttttaatgcccaacattcctcgcattggt
atttcaaaaaaaattgaagccaaggaagaacggcagcgacttaaagacttagtccactct
cagttgcctgatggaatgggcgctatcatcagaacaacgtgcgaaggaagatccgcgcaa
gaaattggcaaggacatttcatttttagtcaatatatggtcagaaataagtaaaaaattt
gcaaactctgacactaaaacggttcttcatcaagatattgatttgccactacaaatagta
cgcgatcacttagacaatgacgtcgaagcaattatcagcgatagtaaagaaagctatgat
acaatctataaattcgtaaaacaaatcgctcctgaatacacccataaggtgaaaatgtat
gagggcagtacccctttatttacgttttataatatagaagatcagatcgagcaggcactt
gaacgtaaagtaccattaaaatcaggcggtacacttattattgaaagtaccgaggcaatg
acagttattgatgtcaataccggtaaatttactggtaaaaaaagccttgaagataccata
ctcaaaaccaacctagaagctgcgcaccaaatagtacgccaacttcgattgcgtaatatt
ggtggtataatcgtcattgattttatcgatatgagctcgagcggaaatcgacaaaagttg
ttcaagttttttgaaaaaacattacgcgaacaagacaaatttcaatcggtagtacttaaa
gtatcagaatttggtttagtacaaatgacgcgtaagcgctcaggaaaaacgctagtccaa
gaactgaccgtgccgtgtactacatgtcatggctatggatttgttccttcattgcgcacc
caagcgtatattattttgcgtaaaataaatgaacactttcatcttaatgcacctaaagct
cacagcactatacatttaaacccagccgtatttgaatacgtcactcatattgagtacaat
tcaatcttaaatttggaaaaaaaatataacactaaaattactttaagcagttctaccaac
tgccctatggcgtcttttactatgagcgcctga
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