Virgibacillus dokdonensis: A21D_00047
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Entry
A21D_00047 CDS
T05261
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00450
Selenocompound metabolism
vpn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
A21D_00047 (csd)
Enzymes [BR:
vpn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
A21D_00047 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
A21D_00047 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Pyridoxal_deC
SelA
Motif
Other DBs
NCBI-ProteinID:
AUJ23163
UniProt:
A0A2K9IWN2
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Position
complement(28913..30133)
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AA seq
406 aa
AA seq
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MDVKAIREQFPILNQEVNGHPFVYLDSSATSQKPIQVIEAVDTYYRTYNSNVHRGVHTLG
TKATTAYEGAREKVRRFIHASSSAEIIFTRGTTTAINTIATSYARTNLQAGDEIIITPME
HHSNIIPWQQAAKATGATLKYIPLQEDGTIRLEDVREMVSEQTKIVAMTHVSNVLGTINP
IKEVAAIAHDHGAIMVVDGAQGAPHMKVDVQELDCDFYAFSGHKMCAPTGIGVLYGKKEL
LENMEPVEFGGEMIDFVNLYDSTWKELPWKFEGGTPIIAGAIGLGAAIDFIEDIGMDAIS
KHEEKLATYAYEKMQAMDGIKIYGPKHRAALITFNLDDVHPHDTATVLDADGIAVRAGHH
CAQPLMRWLDVTATARASLYLYNTEEDVDRLVDGLKKTKEYFGNGF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaagccattcgcgagcaatttcctattctcaaccaggaagtgaatggccat
ccttttgtttatttagattcttcagcgacttcacaaaagcctatccaagtgattgaagct
gtagatacctattatcggacatataattccaatgttcatcgtggcgtgcatacgctaggt
acaaaagcaacaactgcgtatgagggagcaagagaaaaagtacgtcgttttattcatgca
tccagtagtgccgaaattatttttacgcgaggaactacaacggcgattaataccattgca
actagctacgcacggactaacttacaagctggggatgaaattataattacgccaatggag
catcatagtaatattatcccttggcaacaagctgccaaagccaccggtgctacattaaaa
tatataccattacaagaggatgggacgatccggttagaagatgtcagggaaatggtttcc
gaacaaacaaaaatagttgcaatgacgcatgtatctaatgtgttaggtacgatcaatcca
ataaaagaagtagccgctatagctcatgatcatggagctattatggtagtagatggagca
caaggcgcaccgcatatgaaagtagatgttcaagagcttgattgtgatttctatgctttt
tcaggtcataaaatgtgcgctccaactggtattggtgtactttatggaaaaaaagaattg
ctcgaaaatatggagccagttgaatttggcggagaaatgattgatttcgtaaatctttat
gactccacatggaaagagcttccatggaaatttgaaggtggtacgccaattatcgctggt
gctataggtttaggggcggctattgattttatcgaagacatcggtatggatgctatttca
aagcatgaggaaaaacttgccacatatgcctatgaaaaaatgcaagcgatggatgggatt
aagatttatggtccaaaacatcgtgctgcgcttattacgtttaatcttgacgatgtccat
cctcatgatacagcaaccgttttagatgcagatggaattgctgttcgagcaggtcatcat
tgtgcacagccattaatgcgttggcttgatgtgacagcaacggcgagagcaagcctctat
ttgtataatacagaagaagatgttgaccgtctcgtagacggactcaagaagacaaaggag
tattttgggaatggcttttaa
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