Virgibacillus dokdonensis: A21D_00248
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Entry
A21D_00248 CDS
T05261
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpn03032
]
A21D_00248 (topB)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A21D_00248 (topB)
DNA replication proteins [BR:
vpn03032
]
Prokaryotic type
DNA Topoisomerases
A21D_00248 (topB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_LysW
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AUJ23361
UniProt:
A0A2K9J035
LinkDB
All DBs
Position
complement(238554..240734)
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AA seq
726 aa
AA seq
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MSKIVVLAEKPSVGRDIARVLQCNKKGNGFMEGSKYIVTWALGHLVTLADPEAYDAKYKT
WKLEDLPMLPKELKLTVIKKTGKQFQAVKTQLHRKDVHEIVIATDAGREGELVARWVLEK
ANVKKPVKRLWISSVTDKAIKDGFKQLKPGKQFENLYASAVARSEADWYVGLNATRALTT
KFNAQLSTGRVQTPTLAMVASREKEIKTFQPKTYYGIEAKTNKEFSLLWQDEKNNKRLFS
KQTAEKIIQKITNEALQIVHVEKNYKKKSAPQLYDLTELQRDANRMFQFSGKQTLSIMQK
LYEQHKVLTYPRTDSRVISTDIVFTLKDRVKACGVDAYARHANKILRKDLKLPKSVVNNA
KVTDHHAIIPTEQSVMLSDLDDKERKIYDLVVKRFLAVLSDPHEYEQTTIIAEAKGEKFV
ARGKMVKKQGWKELYQRNFSDDIEEDEQQLPTIEKGQQLHPVRYTLTQGETKPPERFTEG
TLLQAMENPVRYMNTYDTKVAHTLKDTGGIGTVATRADIIEKLFHNMYMELKGKYIYLTS
TGKQLLELVPEDLRSPALTAEWEQKLSQIAEGKAKKEQFISEIKGYTKQVVRQIKSSQEK
FKHDNMTGTKCPDCGKLMLEISNKKGRMLVCQDRSCGHRKNIAKQTNARCPNCHKRLELR
GEGEGQIFTCKCGHREKLSTFQTRKEREKKHNVSRKEVNKYLKKQDDDGFANNALAEQLA
KLKLKK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaatagtagtattagcagaaaagccttctgtaggacgggacattgcccgtgta
ttgcaatgcaataaaaaaggaaatggttttatggaaggttcaaaatatatcgtcacatgg
gcgctagggcatcttgtgacgttagcagatcctgaggcttatgatgcaaaatataaaaca
tggaaattagaagaccttccgatgctgccgaaagaattaaaattgacggtaattaaaaaa
acagggaagcaattccaagctgtaaaaacacaacttcatcgaaaagatgttcatgaaatt
gttattgctacagatgctggaagagaaggagagttagtagctcgctgggtgttggaaaaa
gcaaatgtgaaaaaacctgttaagcgcctatggatttcttctgtaacggataaagcaatt
aaagatggatttaaacagttaaaaccggggaaacaattcgaaaatctatatgcttcagcc
gtcgcaagatctgaagcggattggtatgttggtcttaacgctacaagagctttaacaaca
aaatttaatgcccaactatccactggtcgtgtgcaaacaccaaccttagcgatggtagcc
tcaagagaaaaggaaataaaaacgtttcaaccgaaaacatactatggaatagaagcaaaa
acgaacaaagagttttcgcttctttggcaagatgaaaaaaataataaacgacttttctct
aaacaaacagctgaaaaaataattcagaaaataaccaatgaagcgctacaaattgtgcat
gttgagaaaaattataagaaaaaatctgcaccacaattgtatgatttaacagaattacaa
cgtgatgctaaccgaatgtttcaattttctggtaagcaaactttgtctattatgcaaaaa
ctatacgaacagcataaagtattgacctatcctagaacagattcacgtgtgatttcaaca
gatatcgtttttacattaaaagatcgcgtaaaagcgtgtggcgtagatgcttacgctcgt
catgctaacaagattttgcgtaaagatttaaaattaccaaaatcagttgtaaataatgcg
aaggtaacagatcaccatgcgattattcctaccgaacaatctgttatgctttcggatctt
gatgataaagaacgaaaaatttatgatttagttgtaaagcggtttttggcagttttatca
gatcctcatgaatatgaacaaacgacaattatcgctgaagcaaagggtgaaaagtttgtt
gcacgagggaaaatggttaagaaacaaggctggaaggaattatatcagcgcaacttctcg
gatgatatagaagaagatgaacaacaattaccgactatagaaaagggacagcaacttcac
cctgttcgttatacgttaacacaaggagagacgaaaccaccagaacgattcacagaaggt
acattattacaagcaatggaaaaccctgttcgttacatgaatacgtatgatacaaaggta
gcccatacgttaaaagatacgggtgggattggtacggtcgccacacgcgcagatattatt
gaaaaattatttcataacatgtacatggagttgaaaggaaagtatatctatttaacttca
actggcaaacaactgcttgaattagtaccagaagatttacgttccccggcattgacagcc
gaatgggagcaaaagcttagtcaaattgcagaaggaaaagcgaagaaagagcagtttatt
tctgaaattaaaggctacacaaaacaagttgttcggcaaattaaatccagtcaggaaaaa
ttcaaacatgacaatatgacgggaacaaaatgtccagattgtggaaaactcatgctggaa
atatccaataaaaaagggagaatgttagtctgtcaagatcgctcatgtggacatagaaag
aatattgccaagcagacaaacgctcgttgccctaactgccataaacgtctggaacttcgt
ggagaaggagaagggcaaattttcacttgtaaatgtgggcatagagaaaaattatctact
ttccagacaagaaaagaacgagagaaaaagcataatgtttcgagaaaagaagttaataaa
tacttgaaaaagcaggatgatgatggatttgctaataatgcattagcagaacagctggca
aaactaaagttgaagaaataa
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