Virgibacillus dokdonensis: A21D_00547
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Entry
A21D_00547 CDS
T05261
Symbol
pglF
Name
(GenBank) UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00541
O-Antigen nucleotide sugar biosynthesis
vpn00552
Teichoic acid biosynthesis
vpn01100
Metabolic pathways
vpn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
A21D_00547 (pglF)
00552 Teichoic acid biosynthesis
A21D_00547 (pglF)
Enzymes [BR:
vpn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
A21D_00547 (pglF)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
RmlD_sub_bind
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
KR
GFO_IDH_MocA
adh_short
PglD_N
NAD_binding_3
NAD_binding_8
Pyr_redox_2
DAO
Motif
Other DBs
NCBI-ProteinID:
AUJ23660
UniProt:
A0A2K9J3U1
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Position
complement(566375..568204)
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AA seq
609 aa
AA seq
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MGYKTRLGLLILLDSIIVTTAIFIASWVVYPYTDVVSMDAIIISAVALLIFHHVFAYIFK
LYNKVWAYASVGELIAIVQAVTFSVLCASLVQYLANDFSIYRRALLVTWMLHIIFIGGSR
FVWRVLRDRYIKDNHEHKQTLIVGAGAAGAMIARQLRDQSKETELHPVAFVDDDLMKQKM
QLYNIPVQGKVRDIPEVVGDMNIEHIVIAIPSLRNGQLKKIVDFCNQTNAKVQMIPKIED
LMTGKVSVSSLKNVEVEDLLGREPVQLDIHAISKYVSEETVMVTGAGGSIGSEICRQVMK
FSPSKIILVGHGEFSIYTIDMELRGKYCDAGIEIVPVIGDVQDRDRMFEIMEMYKPCIVY
HAAAHKHVPLMEQNPHEAVKNNIIGTKNVAEAADTFGIHTFVLVSTDKAVNPTNVMGATK
RIAEMVIQDLAVRSKTKFTAVRFGNVLGSRGSVIPLFKKQIAAGGPVTVTDPQMTRYFMT
IPEASRLVIQAGTLARGGEIFVLDMGEPVKIVDLAKNLIKLSGYTEEEIPIQFSGIRPGE
KMYEELLGEDEVHSEAVYEKIYVGKTSAVDQDVIRGIMNTFENYTRKDLKDALMQIVYME
HDYVTVKGS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggggtacaaaacaaggctgggtctgttgattttgctagactcaattattgtcacgact
gctatttttattgcatcgtgggtcgtatacccttataccgatgttgtcagcatggacgca
atcattattagcgcagttgcacttttaatttttcatcatgtatttgcgtacatctttaag
ctgtacaacaaagtatgggcctacgccagtgttggcgagttaatcgctatcgtacaagca
gtaactttttccgtcctttgtgcttcgcttgtacaataccttgctaatgactttagtatt
tacagacgtgcattgctcgttacatggatgttacatattatatttattggcggctccaga
tttgtttggcgtgtactacgcgacagatatataaaagataaccacgaacataaacaaaca
cttattgttggtgctggagcagcaggtgcgatgattgcgagacaattgcgtgatcagagt
aaagaaacggaactgcatccagtagcttttgtggatgatgatttaatgaaacagaaaatg
caattatacaatattccagtccaaggaaaagtacgggacattccggaagttgttggcgat
atgaatatcgaacatatcgttattgcaattccgtcgcttcgtaatgggcaattgaagaaa
attgtagatttttgtaaccagacgaacgcgaaagtgcaaatgatcccgaaaattgaagat
ttaatgacaggtaaagtgagcgtaagtagcttgaaaaatgtcgaagttgaggatttactc
ggtcgtgaaccagtgcaactcgacattcatgcgatttccaagtatgtgagtgaagaaacg
gtcatggttacaggcgctggtgggtcgatcggttccgaaatatgtcgacaagtgatgaaa
ttctctcctagtaaaataatattagtaggacatggtgaattcagcatttataccattgat
atggaattacgggggaaatattgtgacgctggcattgaaatcgttcccgttatcggtgat
gtacaagatcgtgatcgtatgtttgagattatggaaatgtacaagccatgcattgtttat
catgcagcagcacacaaacatgtaccattaatggagcagaacccgcatgaagcagtaaag
aataatattatcggtaccaaaaatgtcgctgaagctgcagatacattcggtatacataca
ttcgtattagtttcaacggataaggcggtcaacccgacaaatgtcatgggcgcaacaaaa
cgaattgcagaaatggtgattcaagacttagcagttcgtagtaaaacgaaatttaccgca
gtccgctttggtaacgtactaggaagtcgtggtagtgtcattccactatttaagaagcaa
attgctgctggtggtcctgttacggtgacagatccacaaatgacgcgttactttatgacg
attccagaagcatctagacttgttatccaagctggcactttagctagaggtggcgaaata
ttcgttctcgatatgggcgaaccagtaaaaatcgtcgaccttgcaaaaaatttgatcaag
ctatctggctatacggaagaagaaattcccatccaattctccggcatccgcccaggggaa
aaaatgtatgaagaactgcttggggaagatgaagtacattctgaagcggtgtatgaaaaa
atttacgttggcaaaacgtccgccgtcgatcaagacgtgattagaggaattatgaatact
tttgaaaactacactcgaaaagatttaaaagatgcacttatgcagattgtttatatggaa
catgattatgtcacagtgaaaggttcgtaa
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