Virgibacillus dokdonensis: A21D_00711
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Entry
A21D_00711 CDS
T05261
Symbol
yhcR
Name
(GenBank) Endonuclease YhcR precursor
Organism
vpn
Virgibacillus dokdonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
SNase
LTD
Metallophos
Gram_pos_anchor
tRNA_anti-codon
NadN_nucleosid_C
tRNA_anti-like
Motif
Other DBs
NCBI-ProteinID:
AUJ23823
UniProt:
A0A2K9IYF8
LinkDB
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Position
complement(747533..751327)
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AA seq
1264 aa
AA seq
DB search
MGNQLRKKLCYMVFIIALIVSNLVPTSTAIAADKGDVEAEDLFISEYVEGRSFNKAIEIY
NGTGTDMNLANYQLHLYSNGKTEPTNTETLKGTLKNGDVFVLSHRDADAAIQQVTDLTSA
VVNFNGNDAIALEKNGEIMDVFGEIGNESDFAKDKTFVRNANVSSPTASFGIDQWTNYGK
DIFTYLGSHTMDGDGGQDPSEPTDPDPDPEPETSTIAEARQLANGSEVVVEGIVTANSEA
LSNGNQFSTYMQDETAGVNLFNFEQGDLPEVQKGDRVKVIGTTASYKGLKEVVPASIEVL
EQGQTLPAVQQITLEDLQNKEVAESYEGELVRVNGYIPSIPSSPAGGGYNVSFIDQDYNA
MLLRIMENAVDIRQVAEKQWYDVTGIVSQYNDYQILPTKQADVQVAQQQPEPPSAAGEYE
TTVEKITDGDTIRIADPVFGSDRVRFVNMDTPETYAAKNKAPERQEINENQKYHGDEATK
HVQTYIQPGDKITVKVGEQPTDDYGRLLAEVITADGENVNLEMVRDGYAVSYFIAPIDEK
AYPKYQQAVKEAKDQRLGIWDETNPLLELPFAFRANDDQKGFLRYVGNSATKEYVEPNDW
ADVPVEKRVFFSSAEEAESYGYQSVTGNPSEDNLLVQFLSMNDLHGKIDQQYNLDPDGDG
VFDTYGRMDFVASALKEREQDNPNTFMVHAGDMIGGSSPVSGLLQDEPTVEILEEIGFDV
GTVGNHEFDEGTKEFMRMVNGGEHPEGKGTEGYDGMNFPQLCANCVDKESGETILPPFHM
EEVDGEKIGFIGVNTQASASMVMPDGIADIQFTDEVAAVNEAVAALQQQGVEAIAVLAHI
PADQAGDGATGEAADLAREINDAVDIIFAAHNHQVVDGVVDNKLIVQASEYGKAFADVDV
EIDRTTGDIVKKDAEVVFVKQSDYEADPNVSKILTKYENQIAPMMNEVIGYNATDLTGDY
SNDGDHGLGNLLADGMKSVMNSDFAMMNGGGIRDDLLAGKVTWGDLYNIQPFGNTLMKFE
IKGKDLVPIINAQLSKEYGPDYSISGFHYTWDPEASKVVNVTYPDGTPIEEDKTFTLTVN
NFMGTSKGSKYRPISDLGKNPVMGPTDLDATVEFVKSLNSTEDDPFLYAAEGRISVAKDE
EEPTKNPGTDNGDNGGGTNVDVGNDGNNANKQEKHDGEKTLGKDNHDDNGDNDGNSSMSD
NGNGTLTGGTKHTALGTAGSQHDHGSKLPNTATNLYNLLFIGLALLGGGVALYLRKRYIA
NKAS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccaattacgaaagaaattatgttacatggtattcattattgctttgatagtt
tcaaatctagttccaacatcgactgcgattgcagcagataaaggcgatgtggaagcagaa
gatttgtttatatccgagtatgtggaagggcgttcttttaataaagccattgaaatttat
aatggtacaggtactgatatgaatctagcaaactatcagttgcatttgtacagtaatggc
aaaacagaacctacaaatacggaaaccttaaaagggacacttaaaaatggcgatgttttc
gtactctcccatagagatgcagatgctgccattcaacaggtaacggatcttacatcagca
gtggttaattttaatggaaacgacgcgattgcgttagaaaagaatggcgaaataatggat
gtttttggtgaaatagggaatgagtctgattttgctaaagataagacgttcgtcagaaat
gctaatgtgtcatcaccaactgcttcttttggtatagaccaatggacgaattatgggaaa
gatatatttacttatttaggaagccatacgatggacggggatggaggacaagatccgagt
gaaccaactgacccagatcctgatccggagccagaaacgagcacgattgcggaagcgaga
cagttagcgaatggttcagaagttgttgtggaagggattgtgacagctaattccgaagca
ttgagcaatggcaaccagtttagtacatacatgcaggatgaaaccgctggggttaatttg
tttaactttgaacaaggagacttacctgaggtacaaaaaggagatcgtgtgaaggtaata
ggaacaacagcatcctataaggggctaaaagaagttgttccagcttcgattgaagtactt
gaacagggtcaaactttgccagccgttcaacaaatcacattagaagatttacaaaataaa
gaggtagccgagtcttatgaaggcgagctcgtacgtgtcaatggatatattccttccatt
cctagctctccagcgggtggcggctataatgtgtcatttattgatcaagactataatgct
atgttattacgaatcatggaaaatgcggtagatattcgtcaagttgctgagaaacagtgg
tatgatgttacgggaattgttagtcaatacaacgattatcagattcttccaacgaagcaa
gctgatgtacaagtagcgcagcaacagcccgagccaccttcagcagctggagaatatgaa
acaacggtggaaaaaattacggatggcgatacgatccgcattgctgatcctgtcttcggt
agtgaccgtgttcggtttgttaatatggatacgccagagacctatgcagcaaaaaataaa
gctccagaacgtcaggaaataaacgaaaatcaaaagtatcatggtgacgaagcgacgaag
catgttcaaacctatattcaacctggggataaaatcaccgtcaaagtcggagaacaaccg
acagatgattacggtcgtctccttgcagaggtcattactgctgatggggaaaatgtaaat
ttggaaatggttcgtgatggctatgctgtctcttactttattgcaccaattgatgaaaaa
gcatatccaaaatatcaacaagcggtgaaagaagcaaaagatcaaagattaggtatttgg
gatgaaacgaatccattattggaattaccgtttgctttccgcgcaaatgatgatcaaaaa
ggctttttacgttatgtcggtaattcagctacaaaagaatatgtagagccaaatgattgg
gcagacgtgccggtagaaaagcgcgtatttttctcaagtgcagaagaagcagaatcctat
gggtatcaatctgttacaggaaatccatccgaagataatctgcttgtacaatttttaagc
atgaatgatttacatgggaaaattgatcagcaatacaatttagatcctgatggggacggt
gtttttgatacgtatgggcgcatggattttgtggcatcagctttaaaggaaagagagcag
gataatccgaatacgttcatggtacatgctggtgacatgattggtggaagttcacctgtt
tcaggactactacaagatgagccaacggtggaaattttagaagaaattggctttgatgtc
ggtacagttggaaatcatgagtttgacgaaggtacgaaagaatttatgcgcatggtaaat
ggtggagaacacccagaagggaaaggtacagaaggctatgatggaatgaatttcccgcag
ctttgtgcaaattgtgtggataaggagagtggcgagacgattttaccaccatttcatatg
gaagaagtggatggtgaaaaaatcggttttatcggtgtgaacacacaagcatcagctagt
atggtcatgcctgatggaattgctgatatccaatttacggatgaagtggcggctgtcaat
gaagcagtagctgcattacagcagcaaggtgtcgaagcaattgccgtattagcacatatt
ccagctgatcaagcaggcgatggggcaactggagaagctgctgatctagcgagagaaata
aatgatgccgtggatattatctttgctgcgcataatcaccaagtcgtagatggtgtcgtg
gataataagcttattgttcaagcttccgaatatggaaaagcttttgctgatgtagatgtg
gaaattgatcgcacgactggtgatattgtgaaaaaagatgcggaagttgtatttgtaaag
caaagcgattacgaagcggatccgaatgtcagtaaaattttaacaaaatatgaaaatcaa
attgcgccgatgatgaatgaagtgattggctataatgcaacagatttaacgggtgattac
agtaatgatggtgatcacgggttggggaatctgctcgcagatggaatgaagtcggttatg
aatagtgattttgcaatgatgaatggtggcggcattcgcgacgatttattagctggaaaa
gtaacgtggggagacttgtacaatattcagccattcggtaatacactaatgaaatttgaa
attaaaggaaaagacttagtgccaattattaatgcgcaactgtcgaaagaatacggaccg
gattatagcattagcggttttcattatacgtgggaccccgaggcaagcaaagtagtaaat
gttacgtatccagatggaacgccaattgaggaagacaaaacgtttactttaacggtgaat
aattttatgggaacttcaaaagggtcgaaatatcgtccgattagtgaccttggtaaaaac
cctgtcatgggtccgactgatcttgatgcaacagttgaatttgttaaaagtttaaactcc
acagaggatgacccgtttttatatgcagcggaaggaagaatttccgttgcaaaagatgaa
gaagaaccgacaaaaaatccaggaacagacaatggcgataacggtggtggaacaaatgtt
gatgttggaaatgacggtaacaacgccaataagcaagagaagcatgatggtgagaagacg
ctagggaaagataaccatgatgataatggagataatgacggcaacagctcgatgagtgac
aacggtaatggcacgttgacaggaggtacgaaacatactgcattaggaacagcaggaagt
caacatgatcatggaagtaagttgccaaacacagcaaccaacctttataatctgttattc
atcggactagcacttttgggtggcggtgtagcgttgtatctaagaaaacgatatatagca
aacaaagcaagttga
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