Virgibacillus dokdonensis: A21D_00963
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Entry
A21D_00963 CDS
T05261
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A21D_00963 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpn03021
]
A21D_00963 (rpoE)
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_00963 (rpoE)
Transcription machinery [BR:
vpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A21D_00963 (rpoE)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A21D_00963 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Kri1
Motif
Other DBs
NCBI-ProteinID:
AUJ24075
UniProt:
A0A2K9IX99
LinkDB
All DBs
Position
complement(1046437..1046925)
Genome browser
AA seq
162 aa
AA seq
DB search
MSLNQYSHEEIQKMPMIELASLLLAEERKSFHFKDLFNRLADLKGYTEKQKKDAIAQFYT
DLNVEGRFLTVGENMWGLKRWYPVEKMDEEVNVAPKRKKKAKKKKDEDELDIVDEDIEIL
DDDLDIGLDYDAEELDEDFDDEAYDEDLDEAYDDDDETEDRN
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttaaatcaatatagccacgaagaaattcaaaaaatgccaatgattgagttggct
agcttattactggcagaagaaagaaaatcatttcactttaaagacttatttaatcgttta
gcagatttgaaaggctatacagaaaagcaaaagaaagatgcgattgcacaattttataca
gatttaaatgttgaaggtagatttcttactgttggcgaaaatatgtggggattaaagcgt
tggtaccctgtagaaaaaatggatgaagaagtaaatgttgctccgaaaagaaagaaaaaa
gcaaagaagaaaaaagacgaagatgagttggatattgttgatgaggatattgagatttta
gatgatgatttagatataggtctagattatgatgcagaagaattagacgaagattttgac
gatgaagcatatgatgaagatttggatgaagcgtatgacgatgacgatgaaactgaggat
agaaattaa
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