Virgibacillus dokdonensis: A21D_01349
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Entry
A21D_01349 CDS
T05261
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
A21D_01349 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpn01007
]
A21D_01349 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpn03016
]
A21D_01349 (lysS)
Enzymes [BR:
vpn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
A21D_01349 (lysS)
Amino acid related enzymes [BR:
vpn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
A21D_01349 (lysS)
Transfer RNA biogenesis [BR:
vpn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
A21D_01349 (lysS)
Prokaryotic type
Other AARSs
A21D_01349 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AUJ24433
UniProt:
A0A2K9J070
LinkDB
All DBs
Position
complement(1424580..1426064)
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AA seq
494 aa
AA seq
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MSEEINEHMRVRKEKMEQFKEQGINPFGERFPRSHVASELKDLYDRYSKEELESKEEQVT
IAGRMMTKRGKGKAGFAHIQDISGQIQLYVRKDSVGEAAYEVFKTSDIGDIVGVTGVMFK
TKVGELSVKGTDFQLLTKSLRPLPEKYHGLKDIEQRYRQRYLDLITNMDSKETFVLRSKI
IQAMRRYLDGQGFLEVETPMLHGIPGGATARPFITHHNALDVELYMRIAIELHLKRLIVG
GLEKVYEIGRVFRNEGISTRHNPEFTMIELYEAYADYHDIMDLTERLVAHISKEVLGTTT
VTYGEHEVNLAPKWTRKHMVDAIKEKTGVNFWPQMSDDEARALAKEYGVEITETMIYGHI
VNEFFEQTVEEDLIQPTFIYGHPVEVSPLAKKNKQDERFTDRFELFIVGREHANAFSELN
DPIDQRERFEAQVKERAAGNDEAHYMDTDFLEALEYGLPPTGGLGIGVDRLVMLLTNSAS
IRDVLLFPQMKNKE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagaaataaatgagcatatgcgagtacgtaaagaaaaaatggaacaattcaaa
gaacagggaataaaccctttcggagagcgattcccccgttctcatgttgcaagtgaatta
aaggatttatatgatcgctattctaaggaagaattggaaagtaaggaagagcaagtgacg
atcgcaggaagaatgatgacgaaacgcgggaagggaaaagcaggctttgctcatattcaa
gatattagtggccaaatacagctttatgttcgtaaagattctgtcggagaagctgcatat
gaggtttttaaaacaagtgatattggtgacattgtcggtgtaactggggttatgtttaaa
acgaaggtaggagagttgtctgttaaagggacggatttccaactacttactaaatcttta
cgacctttaccggagaaatatcatggtttgaaagatattgagcagcgataccgtcaacgt
tatctggatttaattacgaacatggatagtaaagagacatttgtattgcgcagtaaaatt
attcaagcaatgcgccgttacttagatggtcaaggttttttagaggtggaaacgcctatg
ttacatggcataccaggaggtgctacagcaagaccttttattacccatcataatgcatta
gatgtagaactctacatgcgtattgctatagaattgcatttaaaaaggttaatcgttggt
ggtttggaaaaagtttacgaaattggtcgtgtgtttcgtaatgaaggaatttccacaaga
cataatccagaatttacgatgatagaattgtatgaggcttatgctgattatcatgacatc
atggatttaacagagcgacttgttgcgcatatctctaaggaagttttaggtacgacaaca
gtaacttatggcgagcatgaagtgaacttagctccaaaatggacgagaaaacatatggtt
gatgcgattaaagaaaagacgggcgttaatttctggccacagatgagcgatgatgaagct
cgagctttagcgaaggagtatggcgtagaaatcactgaaacgatgatatatggtcacatt
gtaaatgagttttttgaacaaacagtcgaagaagatttaattcagccaacgtttatctac
ggtcatcctgtagaagtttcccctttagctaagaaaaataaacaagatgaacgatttacc
gatcgatttgaattgtttattgttggacgagaacatgcaaatgcatttagtgagttaaac
gatccaattgatcagcgtgaacgatttgaagcgcaagtgaaagaaagggcagctggaaat
gatgaagctcattatatggatacagatttcttagaagcactagaatatgggcttccgcca
actggtgggttaggtataggtgtagaccgtctcgtaatgttgttaacaaattcagcttcc
atccgagatgtattattatttccacagatgaaaaataaagaatag
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