Virgibacillus dokdonensis: A21D_01428
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Entry
A21D_01428 CDS
T05261
Symbol
appA_2
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A21D_01428 (appA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpn02000
]
A21D_01428 (appA_2)
Transporters [BR:
vpn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A21D_01428 (appA_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YbbR
Motif
Other DBs
NCBI-ProteinID:
AUJ24511
UniProt:
A0A2K9J3C1
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Position
complement(1505998..1507830)
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AA seq
610 aa
AA seq
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MKRSSWRILLFAIMLGFVFVLAACNSGEESKGDKGEKSEEKGEKSEESGEKIYSIEDFSV
ETTNEGEAIEGGHFKYGVVTDTAFEGLLNYNFYSGVPDSEIIKWFDDSLLSADETHNYTQ
DGAATFEVDDSGKVFTFTIRDNVNWHDGEPVTAEDWLFAYEIIADPDYTGVRYGADFTVI
EGVEEYRNGEADSISGIEVVGDKTLKITYKQASPSLLSGGIWPYALPKHVFKDIPVAEMA
ESDAVRKNPIGFGPFKVDSITPGEAVVLTKNEDYWQGEPKLDKVTVQVVNPKTVVQALET
GEVDAVDSFPTDQYPDNADMANVEFLGNTDMAYTYIGFKLGTWDKEKKEVKPDPNKKMAD
VNLRKAMWHAVDNNAVGEQFYNGLRWNATTLIPPSHPNFHDTENPGIAYDPEEAKKILDE
AGYEDTNGDGMRENPDGEELVINFASMSGGDVAEPIANYYIQAWEKVGLNVQLVDGRLLE
FNSFYDRVGQSGDDDPAIDIFQGAWSVGTDVNPAGLYGRDALFNFSRYASEENDELLADG
VSEEAMELEYRQKVYKDWQQLMLEEVPVFPTVYRAILSPVNNRVMNYSIQYNWGDLHEIA
VTQEETEKAE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagtagttggcgcatactattgtttgctattatgttaggttttgtctttgtg
ctagcagcatgtaatagtggcgaagagagtaaaggagataaaggtgaaaaatctgaagaa
aagggggaaaagtcggaagagagtggcgaaaagatctattccattgaggattttagtgta
gaaactaccaacgaaggtgaagctatcgaaggtggacatttcaaatacggtgttgttacc
gatacagcattcgagggattgttaaactataacttttattcaggtgtacctgacagtgaa
ataattaagtggtttgatgactccttattatcggctgatgaaacgcataattatacacaa
gatggtgctgcaacgttcgaagtagatgatagtggaaaagtatttacttttacaattcga
gataacgtaaattggcatgatggagagcctgttactgcagaagattggttatttgcatat
gaaattatagctgatcctgactatacaggggtacgctatggtgcagatttcaccgtaatt
gaaggtgtagaggaataccggaatggtgaggccgattctatttctggaattgaagtagtc
ggtgataaaacattgaaaattacttataagcaggcttctccttctctactaagtggaggt
atttggccgtatgctctacctaagcatgtctttaaagatatccctgtagctgaaatggca
gagtcagatgcagtccgaaagaatccaattggttttggtccatttaaagtagacagcatt
acaccaggggaagcggttgtgcttaccaaaaatgaagattattggcaaggtgaaccgaag
ttagataaagttactgttcaggtagtcaatccgaaaaccgttgttcaggcactagagacg
ggagaagtagatgctgtagacagttttcctactgaccaatacccagataatgcagatatg
gcaaatgtagagttcttaggcaatacggatatggcttatacctatattggctttaaatta
ggaacatgggataaagagaaaaaagaagtgaaacctgatccaaataaaaaaatggcagat
gtgaatcttcgcaaagcaatgtggcatgcggttgataacaatgcagttggcgaacaattt
tataatggattacgctggaatgcaacaacattgataccgccatcacacccaaattttcat
gataccgaaaaccctggtatagcttatgatccagaagaagcgaaaaaaattctagatgaa
gcaggttatgaggataccaatggagacggtatgcgggaaaatccagatggagaagagtta
gtcattaactttgcttctatgtctggaggagatgtagctgaaccaattgctaattattac
attcaagcttgggagaaagtcggtttaaacgtccagttagttgatggtcgcttacttgag
tttaactcgttttacgatcgagtaggtcaaagcggcgatgacgatccagctatagatatt
tttcaaggtgcttggagtgtcggaacagatgtgaatccagcaggcctatacgggcgtgat
gcgctatttaacttctctcgttatgcaagtgaagaaaatgatgagctgctagcagatgga
gtgtctgaagaagcaatggaattagaataccgtcaaaaagtatataaagattggcaacaa
ttgatgttggaagaggttccagtcttccctaccgtctatcgtgcaatcttatctcctgtt
aataaccgagtaatgaattattcaatacagtataattggggagatttacatgagattgct
gtaactcaagaagaaacggaaaaagctgagtaa
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