Virgibacillus dokdonensis: A21D_01458
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Entry
A21D_01458 CDS
T05261
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
A21D_01458 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vpn01007
]
A21D_01458 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpn03016
]
A21D_01458 (serS)
Enzymes [BR:
vpn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
A21D_01458 (serS)
Amino acid related enzymes [BR:
vpn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
A21D_01458 (serS)
Transfer RNA biogenesis [BR:
vpn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
A21D_01458 (serS)
Prokaryotic type
A21D_01458 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CC149
Dor1
Mis12
GCN5L1
ATG17_like
EXOC6_Sec15_N
ERM_helical
YwqH-like
DUF6468
Myosin_tail_1
NPV_P10
TMPIT
Noelin-1
CCDC113_CCDC96_CC
DUF3450
FapA
KASH_CCD
DUF7307
Nuf2_DHR10-like
Motif
Other DBs
NCBI-ProteinID:
AUJ24539
UniProt:
A0A2K9IXQ7
LinkDB
All DBs
Position
complement(1536831..1538105)
Genome browser
AA seq
424 aa
AA seq
DB search
MLDLKFLRHHFQEVKQKLAHRGEDLSELDHFGELDEKRRQLISETEQLKAKRNEVSKQIS
VLKREKQDAEPAIKEMREVGDQIAELDSELKQINEHLEQIMLSIPNIPHESVPIGEDEDD
NVEVRSWGEKTPFSYEPKPHWDVATDLDIVDFERAGKVTGSRFVFYKGLGARLERALWNL
MLDFHVDEHGYEEMLPPQIVNRTSMTGTGQLPKFAEDAFKLEEWDYYLAPTAEVPVTNYY
RDDILKIDDLPKKFAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVHFVKPEDSYETLE
VLTNHAEKILQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSQHTYREISSCSNFEDFQ
ARRANIRFRREAKAKPEFVHTLNGSGLAIGRTVAAILENYQQEDGTVVIPKALRPYMGGK
KVIQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttgaaatttttacgtcaccatttccaagaagtaaaacaaaaattagcgcat
cgtggtgaggacttatcagaactggatcattttggcgagttagatgaaaagcgtcgtcaa
ctaatttccgagacagagcagttaaaagcgaagcgaaatgaagtatcgaaacaaatctct
gtactaaagcgagaaaagcaagatgctgagcctgcgattaaagaaatgagagaagtaggc
gaccaaattgctgagttggatagcgaattaaagcaaattaatgaacatttagagcaaatc
atgttgtctattcctaatattcctcatgaaagtgtaccaattggtgaagatgaagatgat
aatgtcgaggtgcggagttggggagagaagacgccattttcctatgaaccaaagcctcac
tgggatgtagcaacagacttagacatcgttgactttgaacgagctggcaaagtgactggg
agtaggtttgtcttttataaaggacttggtgcaagattagagcgtgcattatggaacctg
atgttagatttccatgtggatgaacatggctatgaagaaatgttgccaccacaaattgtg
aatcgaactagtatgactgggacagggcaattaccaaaatttgcagaagacgcctttaaa
ctagaagaatgggattattatttagctccgactgcagaagtgccagtaacaaattattat
cgtgatgatattttaaagatagatgatttaccgaaaaaatttgctgcatttagtagctgc
tttcgttctgaagcaggatctgctggaagagacacaagaggtctgattcgtcagcatcaa
tttaataaagtcgagcttgtccattttgttaaacctgaagattcctatgaaacattggaa
gtgttaacaaatcatgcagagaaaatattacagttattagagcttccttatcgtgtgatg
agtatgtgtacaggagatttaggctttacagcagctaagaagtacgatatcgaagtatgg
atccctagtcagcatacgtatcgggaaatttcttcttgctctaattttgaagacttccag
gcaagacgtgccaatatccgttttcgtagagaagcaaaagcaaaaccagaatttgtgcat
acattaaacggctctggattggctattggtcgaactgttgcagctattttggaaaattac
cagcaagaggatggaacggttgttattccaaaagcattgcgtccatatatgggaggaaaa
aaggtcattcaataa
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