Virgibacillus dokdonensis: A21D_01465
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Entry
A21D_01465 CDS
T05261
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpn03032
]
A21D_01465 (gyrA)
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_01465 (gyrA)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A21D_01465 (gyrA)
DNA replication proteins [BR:
vpn03032
]
Prokaryotic type
DNA Topoisomerases
A21D_01465 (gyrA)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A21D_01465 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
PHP
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AUJ24546
UniProt:
A0A2K9IXS7
LinkDB
All DBs
Position
complement(1546116..1548605)
Genome browser
AA seq
829 aa
AA seq
DB search
MADQQRPKVQEINLGKEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRILYAMNDLGMHA
DKAYKKSARIVGEVIGKYHPHGDSAVYEAMVRMAQDFSYRNMLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMELLRDINKDTIDYADNYDGSEREPVVFPARFPNLLVNGASGIAVGMA
TNIPPHNLGETIDAVLALSKHPDITIDELMGEYIHGPDFPTAGQILGRSGIRKAYETGKG
SITVRAKVTIEETANGKPRIIATELPYQVNKAKLIEKIAELVRDKRIDGITDLRDESDRD
GLRVVIELRRDANANVVLNNLYKHTALQTTFGINMLALVDGRPKVLTIKQCLEHYLEHQK
VIIKRRTAFELRKAEARAHILEGLRIALDHLDEVITLIRNSKTTDIARNGLMERFDLSEK
QAQAILDMRLQRLTGLEREKIEDEYKELKQLIEELKAILADEEKVLEIIREELAEIKERF
NDDRRTEIVIGGSDFFEDEDLIPEENIVITLTHQGYIKRLPSSTYRTQNRGGRGIQGMGT
NEDDFVEHLVSTSTHDTILFFTNKGKVYRAKGYEIPEFSRTAKGIPIINLLQVEKGEWVN
AVITVNDYMENQFLFFTTKHGISKRTSLAQFANIRKGGLIAVGLREDDELISVRLTDGMK
DIMIATKNGYLIRFPEDQVRPMGRSAAGVKGISLREDDEVVSMEILQEDANILHVTNKGF
GKQTPESEYRTTNRGGKGIFTCNLTEKTGHVVAVKAVSGEEDLMLITVAGVLIRIPVESI
SVTGRNTMGVRLIRLHEDEEVATVARIEPDEEENTDQEQEQDEAESSHE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaacaacgtccaaaagtacaggaaattaatctcggaaaagagatgcgtaca
tcattcctagattatgctatgagtgtaattgtttctcgtgcattgcctgatgttcgtgac
ggtttaaaacctgtacatcgtagaatattatatgcaatgaatgatttaggtatgcatgca
gataaagcgtataaaaagtcagcacgtattgtaggagaagtaattggtaagtaccaccca
catggtgactcagctgtttacgaagccatggtgcgtatggcacaagattttagttatcga
aatatgcttgttgatgggcatgggaactttggttcggttgatggcgattcagcagcggcc
atgcgttacaccgaagcaagaatgtcgaaaatttctatggaattactaagagatattaat
aaagataccattgattatgccgataactatgatggatcggaaagagaacctgtcgttttt
ccagcacgttttccgaatttgttagtgaatggtgcatctggtattgcggtaggtatggcg
actaacattccaccacataatttaggagaaacgatcgatgcggtactcgcattgagtaag
catccagatattacgattgatgagttaatgggagagtatattcatgggcctgatttccca
actgctgggcaaattctcggtcgtagcgggattcgaaaagcatatgaaacaggaaaaggt
tccattactgttcgagcaaaagtaacaattgaagagacagcgaacgggaagccgagaatt
atcgccactgaattaccttatcaagtaaataaagcaaaattgattgaaaaaattgcggag
cttgttcgagacaagcgcattgatggtataacggatttgcgtgatgaatctgatcgtgac
ggtttaagagtcgttatagagcttagacgtgatgccaatgcgaatgttgttttaaataat
ttgtacaagcataccgcattgcaaacaacatttggcattaatatgttagcacttgttgat
ggacgtccaaaagtgttaacgattaaacaatgtttggagcattatttagagcatcaaaaa
gtaattataaaacggcgaacagcatttgaattacgcaaagcagaagcaagggcacatatt
ttagaaggattgcgcattgcacttgaccatttagatgaagtgattacactaattcgtaac
tccaaaacgacagatattgcccgtaacggtttaatggaacgttttgatttatcagaaaag
caagcacaagccattctagatatgcgtctgcaacgcttaacaggcttagaacgcgaaaaa
attgaagatgaatataaagaattaaaacagctcattgaagaattgaaagccattcttgca
gatgaagaaaaggttttagaaatcattcgtgaggagcttgctgaaatcaaagaacgtttt
aatgatgatcggcgtacagaaattgtaattggtggtagtgatttctttgaggatgaagat
ttaatccctgaagaaaatattgtgattacgttaactcaccaaggttatattaaacgcctt
ccttcttccacttatcgcacgcaaaatcgcggtggccgtggtatacaaggtatgggaacg
aacgaggatgattttgttgagcatcttgtctctacttcgacacatgatacgattttattc
tttacgaataaaggaaaagtatacagagcgaaagggtatgagatccctgaatttagtcga
actgcaaaagggataccaattattaatttgttgcaagtagaaaaaggcgagtgggtcaat
gcagtaataactgttaatgactatatggaaaatcaatttttattctttacgacgaagcat
ggtatttctaagcgcacttcgctagcgcaatttgctaatatacgaaaaggtggtttaatc
gcagtaggtcttagagaagacgatgaacttatatctgtacgtctgacagatggaatgaaa
gatatcatgatcgcgactaaaaatggatatctcattcgttttcctgaagaccaagttcgt
ccaatgggaagaagtgcagcaggtgtaaaaggtatttctttacgagaagatgatgaagtt
gtatcgatggagatcttacaagaagatgcgaatattctccacgtgacgaataaaggtttt
ggaaaacaaacgccagagtcggaataccgcacgacgaaccgtggtgggaaaggtatattc
acttgtaatctaacagaaaaaactggtcacgttgttgcagttaaggcggtttctggagaa
gaagatttgatgttgattaccgtagctggtgtgcttattcgtattccagttgaaagtatt
tcggtcacaggaagaaacacaatgggggttcgtttaattcgtttgcatgaagatgaagaa
gtagcaacagttgctcgaatcgaaccagatgaagaggaaaatacagatcaagagcaagaa
caagacgaagcggaatcgagccacgaataa
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