Virgibacillus dokdonensis: A21D_01814
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Entry
A21D_01814 CDS
T05261
Symbol
ybbH_4
Name
(GenBank) putative HTH-type transcriptional regulator YbbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpn03000
]
A21D_01814 (ybbH_4)
Transcription factors [BR:
vpn03000
]
Prokaryotic type
Helix-turn-helix
Other families
A21D_01814 (ybbH_4)
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_1_2
HTH_7
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AUJ24895
UniProt:
A0A2K9IZL1
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Position
1934920..1935774
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AA seq
284 aa
AA seq
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MDQVNQHGLARIRSNYSRLSEKEKKIADYILQHPKTIIHHTINQIADELEVADSTVFRFC
QRVGFKGYQALKIALAAEMATPVTDIHEKIQAGDDVGTVSEKVFRSNMNTLEDTLKVIDQ
KALHEAVAALIVAEKVEFFGIGGSAIVSIDAYHKFLRSGMQVHANLDAHMQLMAASQLRA
KDVAVIISHSGSTKDIMDILHVLRDKNVTIIAITNFAKSTLSKQADILLYTVSDETEFRP
EALSSRIAELTLIDALYTNVMLAKGESAQQALQDMRKAIALKRL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagtcaaccaacacggtttagcgcgtattcgtagcaattatagccgcttaagt
gagaaagagaagaaaatagctgattatattttgcaacatccgaaaacaattattcatcat
acaattaaccagattgcagatgaattggaggttgcggattcaacggtgtttcgtttttgt
cagcgcgtgggttttaaaggataccaagctttaaaaattgcacttgctgctgaaatggcg
acacccgtcacagatattcacgaaaaaatccaagctggcgatgacgtaggaacggttagt
gaaaaagtttttcgttcgaatatgaatacactagaggatacgttaaaagtaattgatcaa
aaagccttacatgaagctgttgcagcattaattgtagctgaaaaagtagagttttttggg
ataggtgggtcagccattgtatccatcgacgcttatcataaatttcttcgtagtggaatg
caagtgcacgcaaatttggatgcgcatatgcagctaatggcagcatcacaattgcgtgct
aaagatgtggctgttattatttcccactctggttctacaaaagatattatggatatacta
catgttttaagggataaaaatgtcacgattattgcgataacaaactttgctaaatccacg
ctgagcaagcaagcagatattttactttataccgtctcagatgagacagaatttcgacct
gaagcattatcgtcacgaattgcagagctgacattaattgacgcattatatacaaatgta
atgcttgccaaaggagaatccgctcaacaggcactacaagatatgcgcaaggcaattgct
ttaaaacgtttataa
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