Virgibacillus dokdonensis: A21D_02047
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Entry
A21D_02047 CDS
T05261
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
vpn
Virgibacillus dokdonensis
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpn03021
]
A21D_02047 (sigB)
Transcription machinery [BR:
vpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A21D_02047 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
HTH_28
HNF-1_N
Sigma70_ECF
IF2_N
KORA
Motif
Other DBs
NCBI-ProteinID:
AUJ25128
UniProt:
A0A2K9IZJ6
LinkDB
All DBs
Position
2197290..2198081
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AA seq
263 aa
AA seq
DB search
MTTKSQPHNSGRDEVYQLIESLQKEPTDEYLQEQLVLKYKDLVESVARKYSKNSAIHEDL
VQVGMIGLLAAVRRYDSTFGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIK
KAVDTLTMENQSSPSIKEIADFLQVSEEDILETMEMGKSYKALSVDRKVEADSDGSTVAI
LDLVGNEEAGYEQTDQRMLLEKMLPILSEREQKILQYTYFENKSQKETGELLGISQMHVS
RLQRRSLRKLREAIQSEDTEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccacacaatagcggaagagatgaggtttaccagttaattgaa
tcattacaaaaagagcctacggatgagtatttacaggaacagcttgtacttaaatataag
gatctcgtggagtctgttgcacgtaaatattccaaaaatagcgccattcatgaggatctt
gttcaagtaggtatgatcggtttgcttgctgcagtacgtcgatatgattcaacattcggt
aaatcttttgaatcttttgcgatacctaccattattggggaaattaagcgatttataaga
gacaaaacatggagtgtacacgtgcctaggcggattaaagaattaggccctaaaataaaa
aaagctgttgatacgttaacaatggaaaatcaatcttccccttccataaaggaaatagct
gactttctacaagtctctgaggaagatattttggaaacaatggaaatgggaaaaagctat
aaagctctatctgtagacagaaaggtagaagctgattcagacggaagcacagttgctata
ttagatttggttggaaacgaggaagctggctacgaacagacggaccagaggatgttattg
gagaagatgcttcccatcttgtcagaacgtgagcaaaaaatcttacaatacacgtatttc
gaaaataagagtcaaaaagaaactggtgaattgttaggtatatcgcaaatgcatgtttca
aggctgcagagacgttcgttacgcaaattacgagaagctattcaatccgaggatacggag
gtctttgattaa
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