Virgibacillus dokdonensis: A21D_02080
Help
Entry
A21D_02080 CDS
T05261
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A21D_02080 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpn03019
]
A21D_02080 (groL)
03110 Chaperones and folding catalysts [BR:
vpn03110
]
A21D_02080 (groL)
03029 Mitochondrial biogenesis [BR:
vpn03029
]
A21D_02080 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpn04147
]
A21D_02080 (groL)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A21D_02080 (groL)
Messenger RNA biogenesis [BR:
vpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A21D_02080 (groL)
Chaperones and folding catalysts [BR:
vpn03110
]
Heat shock proteins
HSP60 / Chaperonin
A21D_02080 (groL)
Mitochondrial biogenesis [BR:
vpn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A21D_02080 (groL)
Exosome [BR:
vpn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A21D_02080 (groL)
Exosomal proteins of other body fluids (saliva and urine)
A21D_02080 (groL)
Exosomal proteins of breast cancer cells
A21D_02080 (groL)
Exosomal proteins of colorectal cancer cells
A21D_02080 (groL)
Exosomal proteins of bladder cancer cells
A21D_02080 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AUJ25144
UniProt:
A0A2K9J0C0
LinkDB
All DBs
Position
2222308..2223945
Genome browser
AA seq
545 aa
AA seq
DB search
MAKEIKFSEEARRAMLRGVDTLADAVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIE
LEDQFENMGAQLVSEVASKTNDVAGDGTTTATVLAQSMIREGLKNVASGANPVGVRRGIE
KAVEVAVNELKTISKPIESKESIAQVAAVSSDDAEVGNLISEAMERVGNDGVITIEESKG
FNTELEVVEGMQFDRGYASPYMVTDQDKMEAVLEDPYILITDKKIGNIQEVLPVLEQVVQ
QGKPLLMIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIATLTGAEVIT
EDLGLDLKSATMDQLGRAAKVVVTKENTTIVEGSGNPEAISARVAQIRAQAEETTSEFDK
EKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNSTRAAVQEGIVAGGGTAFMNI
YNKVTELNLEGDEATGANIVRRAMEEPVRQIAHNAGLEGSIIVERLKGEKVGVGYNAATG
EWVDMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEEDGGAGGGMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaagtttagtgaagaagcacgtcgcgcaatgctacgtggtgtagat
acattagcggatgcggtaaaagttacattaggacctaaaggacgtaacgttgtattagat
aaaaaattcggttcaccgcttattacgaatgatggtgttacgattgcaaaagaaattgag
cttgaagatcagtttgaaaatatgggtgcacaactcgtatctgaagttgcttctaaaaca
aatgatgttgctggtgacggtacaaccacagcaactgtactcgctcaatccatgattcgt
gaagggttgaaaaacgttgcttctggagctaaccctgttggtgttcgtcgtggaatcgaa
aaggctgttgaagtagcagtaaatgaactaaaaacgatttccaagccaatcgaaagcaaa
gaatctatcgctcaagtagcagcagtttcttctgatgatgcagaagtaggtaaccttatt
tctgaagcaatggaacgtgttggtaacgatggtgttattaccattgaagaatcaaaaggt
tttaacacagagttagaagtagtagaaggtatgcaatttgaccgtggatatgcttctcca
tacatggtaacagaccaagacaaaatggaagctgttttagaagatccatacattctaatt
acagataagaaaatcggtaacattcaagaagtattgcctgtactagagcaagttgttcag
caaggtaaacctttattgatgatcgctgaagatgtagaaggcgaagcgttagctacactt
gttgttaacaaattacgtggtacatttaacgcagtagctgttaaagctcctgggttcggt
gaccgtcgtaaagcaatgcttgaagatattgctacactaacgggcgctgaagttattaca
gaagaccttggtctagatcttaagagcgctacaatggatcaactaggtcgtgctgctaaa
gtagtagttacaaaagaaaacactacaatcgtagaaggttctggaaatccagaagcaatt
tctgcgcgtgttgcacaaatccgtgcgcaagctgaagaaacaacttcagaatttgataaa
gaaaaactacaagagcgtctagctaagctagctggtggagtagcagtagtgaaagttgga
gctgcaacagaaaccgaactaaaagagcgtaaactacgtattgaagatgcgctaaactct
acacgtgctgctgtacaagaaggtattgttgctggtggtggtacagcattcatgaatatt
tacaacaaagtaactgaattgaaccttgaaggagacgaagcaactggtgctaacattgta
cgccgtgctatggaagaaccagtacgtcaaatcgcacacaatgctggtcttgaaggatct
atcattgttgagcgtctaaaaggtgaaaaagtaggtgttggttacaacgctgctactggt
gagtgggtagatatggttgaagctggtatcgttgacccaacaaaagttactcgctctgca
ctacaaaacgctgcatctgtagctgcaatgttcttaacgacagaagcggtagtcgctgac
aagcctgaagaagacggcggcgctggtggcggaatgcctgatatgggcggcatgggtgga
atgggcggcatgatgtaa
DBGET
integrated database retrieval system
