Virgibacillus dokdonensis: A21D_02202
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Entry
A21D_02202 CDS
T05261
Symbol
appA_3
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A21D_02202 (appA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpn02000
]
A21D_02202 (appA_3)
Transporters [BR:
vpn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A21D_02202 (appA_3)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF4969
Motif
Other DBs
NCBI-ProteinID:
AUJ25266
UniProt:
A0A2K9J022
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Position
complement(2341798..2343576)
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AA seq
592 aa
AA seq
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MFNKKWMLLFVLMLFFSFVLVACNGDDTSEEEGNESQAKEDDEASGEPQKGGTLTGAMDT
APAGVFNPIFYEEAYEANILDFTHESLVGQTKELEFEAELAKEWEINEDQTEITLQLEEG
VKWHDGEEFTADDVVFTYKAIASPGYVEAGGIRTEYVVRLLGYEAFNNEETDEFEGVVAE
DDYTVTFKFAEPNVTILKDVSFSIIPEHIFADVPIAEIPEHAATLNAGEVIGTGPFKFTE
MLEREQYVLEKNADYWKSEPYLDQIVWRVVDQSVMLGLLESEEIDFIADPNGVPAPDFET
VDALEHIEIIEQPDFGYQLMGFKVNHRTDADVEAGAIEPDNWVPNEDMGELKVRQAMAHA
IDRKALVDNLLYGHGSVINAPIAQQFWAYDEEATTKFEFDPEKAKSLLDEAGYEDTNDDG
FRETPDGEEWVVNLNYPTGNKLREDSAPIIEQFLEDVGINIDLRQPKEMTAYVEELTNDN
SDWDLFLLGWSLGSADPDPSGLWGADAAYNYQRWNNEQSETLLEEAMQAPEAFEQDYRAK
KYSEWQAAFSEDLPAILLYAQNKIYAFNERLNGVDPMPYSFNNEPENWWLAE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaacaaaaaatggatgttacttttcgtacttatgttattctttagttttgtatta
gtagcttgtaatggtgatgacacctccgaagaggaaggaaatgaaagccaagcaaaagaa
gatgatgaagcaagtggcgagcctcaaaaaggcggcaccttgactggggcaatggataca
gctccagcaggagtctttaatccaatcttttacgaggaagcctatgaggcaaatattctt
gactttacacacgaatcgttagtcgggcaaacaaaagaattagaatttgaagccgaatta
gctaaagagtgggaaattaatgaagaccaaacagaaatcactttacaactagaggaaggc
gtaaaatggcatgatggcgaagaattcactgcggatgatgtcgtttttacgtacaaagca
atagctagtcctggctatgtagaagctggtgggattcgtacagaatacgttgtaagatta
cttggatatgaagcgttcaacaatgaagaaacggatgagtttgaaggggtagtagctgaa
gatgattacaccgtaacttttaaattcgcagagcctaatgtaacgattttaaaagacgtc
tctttttccattattcctgagcatatttttgcagatgtcccaatagctgaaatacctgaa
cacgctgcaactttaaacgctggcgaggtaatcggtactggaccatttaaatttacagaa
atgctagagcgtgagcaatacgtgctagaaaagaacgcagattactggaaatccgagcca
tatttagaccaaattgtgtggcgtgtggttgaccagtctgtcatgttgggtctgctagaa
agtgaagaaattgactttattgctgaccctaatggcgtaccagcacctgacttcgaaaca
gttgacgcactagaacatatagaaattattgaacaacctgacttcgggtatcaattaatg
ggctttaaagttaatcaccgtacagatgccgatgtagaagccggtgctattgagccggac
aactgggtaccaaatgaagatatgggtgaactaaaggttcgccaagcaatggcacatgct
attgaccgcaaggcgcttgttgataacttactgtatggccatggttccgtaattaatgct
ccaatagcacaacaattttgggcttacgatgaagaagcaacaacaaaatttgaatttgat
ccagaaaaagcaaaatcactattagatgaagctggctatgaggatacaaatgatgacggc
ttcagagaaacaccagatggagaagaatgggtggtcaacttaaactatccaactggaaat
aagctacgtgaagactctgcaccaattattgaacagttcttagaagatgtaggaataaac
atcgacctacgtcagccaaaagaaatgaccgcttatgtagaagaactaaccaatgataat
tctgattgggatcttttccttctaggttggagtttaggaagtgctgatccagatccttca
gggctatggggagcagacgctgcttataattatcagcgttggaacaatgaacagtcagaa
acattattggaagaagctatgcaagctcctgaagcatttgaacaagattaccgtgctaaa
aaatatagtgaatggcaagcagccttctcggaagacttaccagctatcttactctatgca
caaaataaaatttatgcctttaacgaacggttaaatggtgtagatccaatgccatattcc
tttaataatgaaccagaaaactggtggttagccgagtaa
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