Virgibacillus dokdonensis: A21D_02242
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Entry
A21D_02242 CDS
T05261
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn03420
Nucleotide excision repair
vpn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A21D_02242 (pcrA)
03430 Mismatch repair
A21D_02242 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpn03400
]
A21D_02242 (pcrA)
Enzymes [BR:
vpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A21D_02242 (pcrA)
DNA repair and recombination proteins [BR:
vpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A21D_02242 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
A21D_02242 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUJ25306
UniProt:
A0A2K9J063
LinkDB
All DBs
Position
2394125..2396347
Genome browser
AA seq
740 aa
AA seq
DB search
MSQTKETLLKGLNQQQREAVMHTDGPLLIMAGAGSGKTRVLTHRIAYLLAEKDVSARNVL
AITFTNKAAREMKERVKRLVGPESEYMWVSTFHSMCVRILRRDIDRIGYNSNFTILDSSD
QLSVVKQVLKNLNIDPKKMEPRAMLGQISAAKNELITPEEYNKRVGNFFERQVGQVYEAY
QKMIVKNQSLDFDDLIMQTIHLFKRVPEVLEYYQRRFQYIHVDEYQDTNHAQYALVKMLA
SRYQNLCVVGDSDQSIYRWRGADIANILTFEKDYPTSRTIMLEQNYRSTKSILAAANHVI
DNNTSRKPKKLWTENEEGKQIHYFQGATEQEEALFVTEKIQQLTREGEYSPSDVAILYRT
NAQSRAIEDTLVKSNMAYQMVGGTKFYERKEIKDIIAYLRLIANPNDDLSFERVVNVPKR
GIGKTSVERLREYAALHDISFNDAVKEVDFTGVSKKAANALAAFSSLIQSLSQQQEFLTA
TDMVEAVLTRTGYETMLKNERSIEAQSRLENLEEFMTVTQDFEAASEDKTLVAFLTDLAL
IADIDQVDEEEIEAEAKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSMFDDEEMEEER
RLAYVGITRAEKELYLTHARMRTLFGRTNMNPISRFINEIPEELIAGIEVANDAMFGRRS
TEPKPNRAQPMKRKAQQMQKTSGAENEMWSSGDKANHKKWGVGTVVKVSGEGEAMELDIA
FPAPVGIKRVLAKFAPITKQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacaaaggaaacattattaaaaggattgaatcaacaacagcgagaagctgtg
atgcatacagacggcccactccttattatggctggtgctggaagtggaaagacacgtgta
ttgacgcatcgaattgcttatttattagcagagaaggacgtttctgctcgtaatgtgcta
gctattacatttacaaataaagcggctagagaaatgaaagaacgtgtgaaaaggttagtt
ggacctgaaagtgagtatatgtgggtatcgacttttcactcgatgtgtgtacgcatttta
cgtagggacattgaccgcattggctataatagtaactttactattttagatagcagtgat
cagctatcggtcgtcaagcaagtgcttaaaaatttgaatatagatccgaaaaaaatggaa
ccaagggcgatgcttggtcaaattagtgctgccaaaaacgaactcattacaccagaagaa
tataataaacgcgtaggtaacttttttgaacggcaagtaggacaagtatatgaagcgtat
caaaagatgattgtaaaaaaccaatcgcttgattttgatgatttgattatgcaaaccatt
catttatttaaacgtgtaccagaagtgttggaatactaccaacgccgttttcaatatatt
catgttgatgagtatcaagatacgaaccacgcgcaatatgcacttgtaaaaatgctagcg
agtcgttatcaaaacttatgtgttgtcggtgattccgatcagtccatttaccgctggcga
ggtgctgatattgcgaatatcctaacctttgaaaaggattatccgacctcaagaaccatt
atgttggaacaaaattaccgctcgacaaagtctattttagctgctgcgaaccatgtgatt
gataataacacaagcaggaagccaaaaaagctatggacggaaaatgaggaaggcaaacaa
attcattactttcaaggtgcaacggagcaagaggaagctttatttgtcacggaaaaaatt
cagcaattaactcgagaaggggaatactccccaagtgatgtggcgatactatatcgaacg
aatgcacaatctcgtgctattgaggataccttggtgaaatcgaatatggcgtatcaaatg
gtaggcggtacgaaattctatgagcgcaaagaaattaaggacattattgcttacttgcgc
ttaattgccaatcctaatgatgatttaagctttgagcgtgttgtcaatgtgccgaaacga
ggaattgggaaaacgtcggtggaacgtttgcgcgaatatgctgctcttcacgatatctct
tttaatgatgcagtgaaggaagtcgattttacgggcgtatctaaaaaagcagctaacgca
cttgctgcattttcaagtctcattcaatcgttgtcgcaacaacaagagtttttaacagct
acagatatggtagaggctgtattaacgcgaaccggctatgaaacgatgttaaaaaatgag
cgatctatcgaagcacaaagccgtttggaaaacttagaagaattcatgacggttacgcaa
gattttgaagcagctagtgaagataaaacacttgttgcctttttgacagatttagcgtta
attgctgatattgatcaagtagatgaagaggaaatagaagcagaagctaaaattacatta
atgacattacatgcagcaaaaggattagaatttccagttgtatttttgatcggtatggaa
gaaaatgttttcccgcatagccgatccatgtttgatgacgaagaaatggaagaagaacgt
cgattagcttatgtcggtattacgcgtgctgaaaaagaactttatctcacccatgcgcgt
atgcgaaccttgtttggacgaacgaatatgaatcctattagccggtttattaatgaaata
ccggaagaattaatagcaggtatcgaagtagctaacgatgccatgtttggcagaagaagt
acagaaccgaagccgaatagagcgcaaccgatgaagcgtaaagcacagcaaatgcagaaa
acatccggtgctgaaaatgaaatgtggtcatctggcgataaagcgaaccataaaaaatgg
ggcgttggtacggttgtaaaagtaagtggagaaggtgaagcaatggagcttgatattgct
ttccctgcaccagtcggcattaaacgtgtactagcaaaatttgcaccaattacgaaacaa
taa
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