Virgibacillus dokdonensis: A21D_02346
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Entry
A21D_02346 CDS
T05261
Symbol
gabD_1
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00250
Alanine, aspartate and glutamate metabolism
vpn00310
Lysine degradation
vpn00350
Tyrosine metabolism
vpn00650
Butanoate metabolism
vpn00760
Nicotinate and nicotinamide metabolism
vpn01100
Metabolic pathways
vpn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A21D_02346 (gabD_1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A21D_02346 (gabD_1)
00310 Lysine degradation
A21D_02346 (gabD_1)
00350 Tyrosine metabolism
A21D_02346 (gabD_1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A21D_02346 (gabD_1)
Enzymes [BR:
vpn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A21D_02346 (gabD_1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A21D_02346 (gabD_1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A21D_02346 (gabD_1)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AUJ25410
UniProt:
A0A2K9J7G5
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Position
complement(2513844..2515292)
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AA seq
482 aa
AA seq
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MFNTYTKSVFIDGEWQDINEKLAEVIYNPATGKAITSVAYAGAEETKQAIHAALQAFPIW
SEKTGRERASFLYKASQLMLEDAERLGNILTMEQGKPLREAVGEVKGAAQFLLWYAEEAS
RNYGEWLPSSTNAKRLVVMSQPVGVIGAITPWNFPSSMITRKLAPALAAGCTAVLKPAPE
TPLSAIEIMKIFERAGLPKGVVNLVTGDAEAIGKQLLTHKEVRLLTFTGSTAVGKHLMRE
SAEHVKKLSLELGGHAPSIVFPDANLAKAASLVLASKFRNNGQTCICTNRLFVHESVVAD
FIQLLKQKISKFQIGDGLEDGTTIGPLINEQACKKVEGHVQNAVEKGAVIEYGGERWHKQ
GFSHCYFNPTILSNITEDMKIMHEETFGPVLPVQPFSDETEVITKANDTDYGLAAYVFTE
NTSTAIRVSEKLDYGIVGVNDVFPATPEAPFGGVKQSGLGKEGGHHGMEEFMEKKLISFG
MN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatacctatacaaaaagtgtttttattgatggcgagtggcaggatataaacgaa
aaattagcggaagttatttataatccagctactggaaaagcaatcacatcggttgcttat
gcaggtgcagaggaaacaaagcaagctattcatgcagcgttacaagcattccctatatgg
agtgaaaaaacgggaagagaacgtgcatcatttctttataaggcttcgcaactgatgtta
gaagacgcggagcgactcggaaacatattgacaatggaacaaggtaaaccactccgtgaa
gcagtaggagaagtaaaaggagcagcgcaatttttattatggtacgccgaagaagcaagt
agaaattacggggaatggcttccttcatcgacaaatgcgaaaagactcgttgtcatgtca
caaccagttggcgtgattggtgctataaccccgtggaactttccatcttctatgattacg
cgaaaacttgcacccgcattagctgcaggatgtacggctgtacttaaacctgcaccggag
accccattatctgctattgaaattatgaagatttttgaacgtgcgggcttaccaaaaggc
gtagtaaacctcgtaacaggagatgcagaagcaattggtaaacaattacttacacataaa
gaagttcgactacttacctttacaggttcaacagctgtcggaaagcatttaatgcgggaa
agtgctgagcatgtaaagaagctttctttagaattaggcgggcatgcaccaagtatcgtt
tttcccgatgccaatttagcaaaagccgcttcgcttgttttggcgagcaagttccgtaat
aacgggcaaacttgcatatgtacaaatcgcctgtttgtccatgaatcagtggttgctgat
ttcatccagttattaaaacaaaagatttccaaatttcaaattggcgatggtttagaagat
ggcacaactattggcccgttaattaatgaacaggcatgcaaaaaagtagaaggacatgtt
caaaatgccgttgaaaaaggagcagttatcgaatacgggggagagcgttggcataaacaa
ggattttctcattgttatttcaatccaaccatcctttctaacataacagaggatatgaag
attatgcatgaagaaacgtttggacctgtactgccagttcaaccgttctctgatgagaca
gaagtaattacaaaggctaacgatacagactatggtttagccgcttatgttttcacagaa
aatacaagtacggctattcgtgtatccgaaaagcttgattatggtatcgttggtgtgaat
gacgtattccctgcaacacctgaagcaccatttggaggtgtgaaacaatctggcttgggg
aaagaaggcggtcatcacgggatggaagaatttatggaaaagaaattgatttcttttggt
atgaattaa
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